Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
R3HCC1Q9Y3T6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
R3HCC1Q9Y3T6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
R3HCC1Q9Y3T6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 AL512353.2-201ENST00000448759 1962 ntBASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
R3HCC1Q9Y3T6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 AC046158.3-201ENST00000624947 2558 ntBASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 AL353807.1-201ENST00000427475 662 ntBASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 AP001412.1-201ENST00000608405 714 ntBASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.13■□□□□ 0.97
R3HCC1Q9Y3T6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 AC073592.3-201ENST00000625118 1834 ntBASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms