Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 AC113404.2-201ENST00000507884 177 ntBASIC24.1■■□□□ 1.45
SPG7Q9UQ90 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 BNIP3P18-201ENST00000593976 575 ntBASIC24.1■■□□□ 1.45
SPG7Q9UQ90 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC24.1■■□□□ 1.45
SPG7Q9UQ90 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SPG7Q9UQ90 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC24.09■■□□□ 1.45
SPG7Q9UQ90 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC24.09■■□□□ 1.45
SPG7Q9UQ90 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SPG7Q9UQ90 TSPY12P-201ENST00000421279 868 ntBASIC24.09■■□□□ 1.45
SPG7Q9UQ90 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SPG7Q9UQ90 AC008687.5-201ENST00000593746 558 ntBASIC24.09■■□□□ 1.45
SPG7Q9UQ90 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
SPG7Q9UQ90 ANKRD20A8P-203ENST00000641373 517 ntBASIC24.09■■□□□ 1.45
SPG7Q9UQ90 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC24.09■■□□□ 1.45
SPG7Q9UQ90 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SPG7Q9UQ90 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
SPG7Q9UQ90 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC24.09■■□□□ 1.45
SPG7Q9UQ90 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SPG7Q9UQ90 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SPG7Q9UQ90 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
SPG7Q9UQ90 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 EMD-201ENST00000369835 966 ntTSL 3 BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 AC064862.7-201ENST00000604520 867 ntBASIC24.08■■□□□ 1.45
SPG7Q9UQ90 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
SPG7Q9UQ90 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
SPG7Q9UQ90 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC24.08■■□□□ 1.44
SPG7Q9UQ90 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
SPG7Q9UQ90 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
SPG7Q9UQ90 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC24.08■■□□□ 1.44
SPG7Q9UQ90 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SPG7Q9UQ90 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
SPG7Q9UQ90 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SPG7Q9UQ90 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SPG7Q9UQ90 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SPG7Q9UQ90 PPIE-208ENST00000470213 927 ntTSL 3 BASIC24.07■■□□□ 1.44
SPG7Q9UQ90 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC24.07■■□□□ 1.44
SPG7Q9UQ90 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC24.07■■□□□ 1.44
SPG7Q9UQ90 CALM1-205ENST00000553542 877 ntTSL 5 BASIC24.07■■□□□ 1.44
SPG7Q9UQ90 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC24.07■■□□□ 1.44
SPG7Q9UQ90 MIR5100-201ENST00000579544 119 ntBASIC24.07■■□□□ 1.44
SPG7Q9UQ90 AL591684.3-201ENST00000605187 298 ntBASIC24.07■■□□□ 1.44
SPG7Q9UQ90 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
SPG7Q9UQ90 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC24.07■■□□□ 1.44
SPG7Q9UQ90 AC083906.6-201ENST00000641366 219 ntBASIC24.07■■□□□ 1.44
SPG7Q9UQ90 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC24.07■■□□□ 1.44
SPG7Q9UQ90 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SPG7Q9UQ90 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SPG7Q9UQ90 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SPG7Q9UQ90 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SPG7Q9UQ90 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
SPG7Q9UQ90 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SPG7Q9UQ90 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SPG7Q9UQ90 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SPG7Q9UQ90 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC24.06■■□□□ 1.44
SPG7Q9UQ90 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
SPG7Q9UQ90 BX640515.1-201ENST00000617215 977 ntBASIC24.06■■□□□ 1.44
SPG7Q9UQ90 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
SPG7Q9UQ90 TP73-AS1-207ENST00000624167 988 ntBASIC24.06■■□□□ 1.44
SPG7Q9UQ90 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC24.06■■□□□ 1.44
SPG7Q9UQ90 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
SPG7Q9UQ90 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
SPG7Q9UQ90 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC24.06■■□□□ 1.44
SPG7Q9UQ90 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms