Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDZRN3Q9UPQ7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDZRN3Q9UPQ7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC23.8■■□□□ 1.4
PDZRN3Q9UPQ7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDZRN3Q9UPQ7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDZRN3Q9UPQ7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDZRN3Q9UPQ7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC23.8■■□□□ 1.4
PDZRN3Q9UPQ7 CR769767.2-201ENST00000622735 460 ntBASIC23.8■■□□□ 1.4
PDZRN3Q9UPQ7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDZRN3Q9UPQ7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDZRN3Q9UPQ7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDZRN3Q9UPQ7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDZRN3Q9UPQ7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PDZRN3Q9UPQ7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC23.8■■□□□ 1.4
PDZRN3Q9UPQ7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDZRN3Q9UPQ7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 Z98044.1-201ENST00000632503 1764 ntBASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 BX276092.5-203ENST00000456199 560 ntBASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC23.79■■□□□ 1.4
PDZRN3Q9UPQ7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 AC007613.1-201ENST00000572811 2597 ntBASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 NUS1P1-201ENST00000446295 882 ntBASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 AC011498.5-201ENST00000592027 486 ntBASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
PDZRN3Q9UPQ7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 MIR4674-201ENST00000582457 87 ntBASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDZRN3Q9UPQ7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 MIR3180-1-201ENST00000580374 94 ntBASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 MIR3180-3-201ENST00000584616 94 ntBASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 KRT8P10-201ENST00000450021 1447 ntBASIC23.76■■□□□ 1.39
PDZRN3Q9UPQ7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PDZRN3Q9UPQ7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.75■■□□□ 1.39
PDZRN3Q9UPQ7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC23.75■■□□□ 1.39
PDZRN3Q9UPQ7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms