Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBQLN1Q9UMX0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBQLN1Q9UMX0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBQLN1Q9UMX0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 SDHAP2-201ENST00000455183 2001 ntBASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 BX323043.1-201ENST00000641006 1765 ntBASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 KRT8P26-201ENST00000534154 1276 ntBASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.78■□□□□ 0.76
UBQLN1Q9UMX0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 TSPY22P-201ENST00000427496 604 ntBASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 AC005332.3-201ENST00000589904 676 ntBASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN1Q9UMX0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
UBQLN1Q9UMX0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
UBQLN1Q9UMX0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
UBQLN1Q9UMX0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
UBQLN1Q9UMX0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.77■□□□□ 0.75
UBQLN1Q9UMX0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 Z83836.1-201ENST00000624605 1642 ntBASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 AC016734.2-201ENST00000624325 1377 ntBASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 ATP5G2P1-201ENST00000433580 426 ntBASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 TSSC2-201ENST00000450217 709 ntBASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 AC008687.5-201ENST00000593746 558 ntBASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 AC018445.3-201ENST00000624177 1945 ntBASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.76■□□□□ 0.75
UBQLN1Q9UMX0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN1Q9UMX0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms