Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TMEM248Q9NWD8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 LINC01311-201ENST00000565162 1445 ntBASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 AC083849.1-201ENST00000615227 514 ntBASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 AC099343.3-201ENST00000605834 2503 ntBASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM248Q9NWD8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 AC090164.3-201ENST00000610780 2143 ntBASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 AL020996.1-203ENST00000536896 2307 ntBASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM248Q9NWD8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.83■□□□□ 0.61
TMEM248Q9NWD8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.83■□□□□ 0.61
TMEM248Q9NWD8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM248Q9NWD8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.83■□□□□ 0.61
TMEM248Q9NWD8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.83■□□□□ 0.61
TMEM248Q9NWD8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
TMEM248Q9NWD8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM248Q9NWD8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.83■□□□□ 0.61
TMEM248Q9NWD8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.83■□□□□ 0.61
TMEM248Q9NWD8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM248Q9NWD8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM248Q9NWD8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM248Q9NWD8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM248Q9NWD8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM248Q9NWD8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM248Q9NWD8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM248Q9NWD8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM248Q9NWD8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM248Q9NWD8 AL031133.1-201ENST00000406807 723 ntBASIC18.83■□□□□ 0.6
TMEM248Q9NWD8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.83■□□□□ 0.6
TMEM248Q9NWD8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM248Q9NWD8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.83■□□□□ 0.6
TMEM248Q9NWD8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.83■□□□□ 0.6
TMEM248Q9NWD8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.83■□□□□ 0.6
TMEM248Q9NWD8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.83■□□□□ 0.6
TMEM248Q9NWD8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TMEM248Q9NWD8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.83■□□□□ 0.6
TMEM248Q9NWD8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM248Q9NWD8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM248Q9NWD8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM248Q9NWD8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TMEM248Q9NWD8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM248Q9NWD8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TMEM248Q9NWD8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM248Q9NWD8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms