Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC22.51■■□□□ 1.19
ECHDC1Q9NTX5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ECHDC1Q9NTX5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.51■■□□□ 1.19
ECHDC1Q9NTX5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ECHDC1Q9NTX5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
ECHDC1Q9NTX5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC22.51■■□□□ 1.19
ECHDC1Q9NTX5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 SPDYE15P-201ENST00000424157 909 ntBASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 RASA4DP-201ENST00000460726 1199 ntBASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 AC034232.1-201ENST00000506026 1064 ntBASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC1Q9NTX5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 STARP1-201ENST00000397973 869 ntBASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ECHDC1Q9NTX5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 DUX4L26-201ENST00000489078 1255 ntBASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 AC063952.2-201ENST00000498792 1227 ntBASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC1Q9NTX5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 HOMER2P1-201ENST00000455653 964 ntBASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms