Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 AL049637.2-201ENST00000641778 930 ntBASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLRC4Q9NPP4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 CRYGFP-201ENST00000418459 633 ntBASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 AC012618.2-201ENST00000428058 849 ntBASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 MCCD1P1-208ENST00000445732 328 ntBASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 AC233702.5-201ENST00000584107 538 ntBASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 AC093677.2-201ENST00000600169 1863 ntBASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.04■□□□□ 0.8
NLRC4Q9NPP4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 MIR564-202ENST00000385049 94 ntBASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 BCL2-203ENST00000589955 5011 ntBASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NLRC4Q9NPP4 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.02■□□□□ 0.8
NLRC4Q9NPP4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NLRC4Q9NPP4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NLRC4Q9NPP4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.02■□□□□ 0.8
NLRC4Q9NPP4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NLRC4Q9NPP4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NLRC4Q9NPP4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NLRC4Q9NPP4 KRT18P41-201ENST00000518924 1277 ntBASIC20.02■□□□□ 0.8
NLRC4Q9NPP4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.02■□□□□ 0.8
NLRC4Q9NPP4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.02■□□□□ 0.8
NLRC4Q9NPP4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.02■□□□□ 0.8
NLRC4Q9NPP4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NLRC4Q9NPP4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NLRC4Q9NPP4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NLRC4Q9NPP4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.02■□□□□ 0.8
NLRC4Q9NPP4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NLRC4Q9NPP4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NLRC4Q9NPP4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
NLRC4Q9NPP4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
NLRC4Q9NPP4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.02■□□□□ 0.79
NLRC4Q9NPP4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms