Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 AP000593.1-201ENST00000393668 712 ntBASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 AC097488.1-201ENST00000507834 756 ntBASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.78■□□□□ 0.44
LRTM1Q9HBL6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 ESPNP-201ENST00000270691 2015 ntBASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 RPS2P55-201ENST00000397318 883 ntBASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 AC107956.1-201ENST00000494359 873 ntBASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRTM1Q9HBL6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.77■□□□□ 0.43
LRTM1Q9HBL6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.77■□□□□ 0.43
LRTM1Q9HBL6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
LRTM1Q9HBL6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LRTM1Q9HBL6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.77■□□□□ 0.43
LRTM1Q9HBL6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRTM1Q9HBL6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRTM1Q9HBL6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 PCDHB18P-201ENST00000524813 2368 ntBASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 AC034236.2-201ENST00000606662 1610 ntBASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 AL158047.1-201ENST00000445918 881 ntBASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 UBE2SP1-201ENST00000450587 669 ntBASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 AC098590.1-201ENST00000468126 897 ntBASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms