Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
MS4A6AQ9H2W1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MS4A6AQ9H2W1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MS4A6AQ9H2W1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
MS4A6AQ9H2W1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MS4A6AQ9H2W1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MS4A6AQ9H2W1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.27□□□□□ -0.13
MS4A6AQ9H2W1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
MS4A6AQ9H2W1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MS4A6AQ9H2W1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 UNC93B2-201ENST00000285383 730 ntBASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 MFAP1P1-201ENST00000442257 1255 ntBASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 AC090164.3-201ENST00000610780 2143 ntBASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
MS4A6AQ9H2W1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 AC096733.2-201ENST00000609937 1394 ntBASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 AC139713.2-201ENST00000641328 2723 ntBASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 AC093827.2-201ENST00000512654 315 ntBASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 MIR4497-201ENST00000583208 89 ntBASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MS4A6AQ9H2W1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 CRYGFP-201ENST00000418459 633 ntBASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 AC066615.1-201ENST00000640911 628 ntBASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 AC141586.5-201ENST00000624546 2050 ntBASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms