Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 MTND2P22-201ENST00000444325 1033 ntBASIC20.53■□□□□ 0.88
RNF39Q9H2S5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 GCSHP2-201ENST00000560971 527 ntBASIC20.53■□□□□ 0.88
RNF39Q9H2S5 AC091135.1-201ENST00000585943 307 ntBASIC20.53■□□□□ 0.88
RNF39Q9H2S5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 MTND4P4-201ENST00000439033 1366 ntBASIC20.53■□□□□ 0.88
RNF39Q9H2S5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF39Q9H2S5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 NUCKS1P1-201ENST00000452067 703 ntBASIC20.52■□□□□ 0.88
RNF39Q9H2S5 LINC01697-204ENST00000458316 1122 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 AC110760.3-202ENST00000515177 371 ntBASIC20.52■□□□□ 0.88
RNF39Q9H2S5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 AP000842.1-201ENST00000524467 698 ntBASIC20.52■□□□□ 0.88
RNF39Q9H2S5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 OR4A48P-201ENST00000531359 391 ntBASIC20.52■□□□□ 0.88
RNF39Q9H2S5 AC091515.1-201ENST00000548110 679 ntBASIC20.52■□□□□ 0.88
RNF39Q9H2S5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 AC116348.1-201ENST00000562525 528 ntTSL 3 BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC20.52■□□□□ 0.88
RNF39Q9H2S5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF39Q9H2S5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.52■□□□□ 0.87
RNF39Q9H2S5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RNF39Q9H2S5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RNF39Q9H2S5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RNF39Q9H2S5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF39Q9H2S5 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF39Q9H2S5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF39Q9H2S5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RNF39Q9H2S5 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF39Q9H2S5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF39Q9H2S5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF39Q9H2S5 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF39Q9H2S5 TPT1P6-201ENST00000458298 514 ntBASIC20.51■□□□□ 0.87
RNF39Q9H2S5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF39Q9H2S5 AC013731.1-201ENST00000604340 883 ntBASIC20.51■□□□□ 0.87
RNF39Q9H2S5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.51■□□□□ 0.87
RNF39Q9H2S5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF39Q9H2S5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF39Q9H2S5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF39Q9H2S5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RNF39Q9H2S5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF39Q9H2S5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RNF39Q9H2S5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RNF39Q9H2S5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
RNF39Q9H2S5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 HOMER2P1-201ENST00000455653 964 ntBASIC20.5■□□□□ 0.87
RNF39Q9H2S5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 HEXB-205ENST00000509579 806 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 NEK4P2-201ENST00000580004 1012 ntBASIC20.5■□□□□ 0.87
RNF39Q9H2S5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 OR10AE1P-201ENST00000606962 1029 ntBASIC20.5■□□□□ 0.87
RNF39Q9H2S5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF39Q9H2S5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms