Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 AL109659.2-201ENST00000606809 1674 ntBASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 MCCD1P1-208ENST00000445732 328 ntBASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 AC126763.1-201ENST00000552015 2118 ntBASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC68Q9H2F9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 TSPY7P-201ENST00000431358 1114 ntBASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 AP005242.2-201ENST00000580065 1175 ntBASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 AC073592.3-201ENST00000625118 1834 ntBASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC68Q9H2F9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 KRT17P2-201ENST00000300992 1314 ntBASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
CCDC68Q9H2F9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CCDC68Q9H2F9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC68Q9H2F9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.52■□□□□ 0.55
CCDC68Q9H2F9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms