Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
DDX47Q9H0S4 KRT16P5-201ENST00000455284 522 ntBASIC19.27■□□□□ 0.68
DDX47Q9H0S4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.27■□□□□ 0.68
DDX47Q9H0S4 AC104771.1-201ENST00000603335 964 ntBASIC19.27■□□□□ 0.68
DDX47Q9H0S4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX47Q9H0S4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX47Q9H0S4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX47Q9H0S4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX47Q9H0S4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX47Q9H0S4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
DDX47Q9H0S4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.27■□□□□ 0.67
DDX47Q9H0S4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DDX47Q9H0S4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
DDX47Q9H0S4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
DDX47Q9H0S4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
DDX47Q9H0S4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.27■□□□□ 0.67
DDX47Q9H0S4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DDX47Q9H0S4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
DDX47Q9H0S4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
DDX47Q9H0S4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
DDX47Q9H0S4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.27■□□□□ 0.67
DDX47Q9H0S4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 AC091390.4-202ENST00000476426 537 ntBASIC19.26■□□□□ 0.67
DDX47Q9H0S4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 AP003097.1-201ENST00000530657 1135 ntBASIC19.26■□□□□ 0.67
DDX47Q9H0S4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 AC131212.4-201ENST00000623606 975 ntBASIC19.26■□□□□ 0.67
DDX47Q9H0S4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.26■□□□□ 0.67
DDX47Q9H0S4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 KRT17P3-201ENST00000420566 1262 ntBASIC19.25■□□□□ 0.67
DDX47Q9H0S4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.25■□□□□ 0.67
DDX47Q9H0S4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.25■□□□□ 0.67
DDX47Q9H0S4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 AC239809.2-201ENST00000415381 517 ntBASIC19.24■□□□□ 0.67
DDX47Q9H0S4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms