Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS1Q99742 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS1Q99742 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS1Q99742 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NPAS1Q99742 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS1Q99742 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.82■□□□□ 0.28
NPAS1Q99742 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS1Q99742 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NPAS1Q99742 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NPAS1Q99742 FAM210CP-201ENST00000445714 574 ntBASIC16.82■□□□□ 0.28
NPAS1Q99742 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.82■□□□□ 0.28
NPAS1Q99742 SEC1P-202ENST00000473944 940 ntBASIC16.82■□□□□ 0.28
NPAS1Q99742 YBX1P2-201ENST00000489612 999 ntBASIC16.82■□□□□ 0.28
NPAS1Q99742 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.82■□□□□ 0.28
NPAS1Q99742 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.82■□□□□ 0.28
NPAS1Q99742 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS1Q99742 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NPAS1Q99742 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
NPAS1Q99742 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS1Q99742 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
NPAS1Q99742 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NPAS1Q99742 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS1Q99742 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS1Q99742 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NPAS1Q99742 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS1Q99742 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.81■□□□□ 0.28
NPAS1Q99742 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.81■□□□□ 0.28
NPAS1Q99742 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 COX11P1-201ENST00000489116 835 ntBASIC16.81■□□□□ 0.28
NPAS1Q99742 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.81■□□□□ 0.28
NPAS1Q99742 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.81■□□□□ 0.28
NPAS1Q99742 AC112497.1-201ENST00000624824 639 ntBASIC16.81■□□□□ 0.28
NPAS1Q99742 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS1Q99742 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
NPAS1Q99742 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.81■□□□□ 0.28
NPAS1Q99742 AC009113.1-201ENST00000570267 2443 ntBASIC16.81■□□□□ 0.28
NPAS1Q99742 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NPAS1Q99742 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS1Q99742 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.81■□□□□ 0.28
NPAS1Q99742 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS1Q99742 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS1Q99742 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
NPAS1Q99742 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS1Q99742 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS1Q99742 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS1Q99742 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NPAS1Q99742 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NPAS1Q99742 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS1Q99742 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NPAS1Q99742 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS1Q99742 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS1Q99742 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS1Q99742 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS1Q99742 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS1Q99742 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS1Q99742 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS1Q99742 BX664615.1-201ENST00000443558 458 ntBASIC16.8■□□□□ 0.28
NPAS1Q99742 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS1Q99742 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.8■□□□□ 0.28
NPAS1Q99742 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS1Q99742 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS1Q99742 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.8■□□□□ 0.28
NPAS1Q99742 AL512604.3-201ENST00000569583 964 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms