Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CITED4Q96RK1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CITED4Q96RK1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.85■□□□□ 0.13
CITED4Q96RK1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.85■□□□□ 0.13
CITED4Q96RK1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.85■□□□□ 0.13
CITED4Q96RK1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CITED4Q96RK1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CITED4Q96RK1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CITED4Q96RK1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.84■□□□□ 0.13
CITED4Q96RK1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CITED4Q96RK1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CITED4Q96RK1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
CITED4Q96RK1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.84■□□□□ 0.13
CITED4Q96RK1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.84■□□□□ 0.13
CITED4Q96RK1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CITED4Q96RK1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CITED4Q96RK1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CITED4Q96RK1 AC063926.3-201ENST00000624734 5658 ntBASIC15.84■□□□□ 0.13
CITED4Q96RK1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.84■□□□□ 0.13
CITED4Q96RK1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CITED4Q96RK1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CITED4Q96RK1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CITED4Q96RK1 NCF1B-203ENST00000435988 1254 ntBASIC15.84■□□□□ 0.13
CITED4Q96RK1 CROCCP5-201ENST00000436658 830 ntBASIC15.84■□□□□ 0.13
CITED4Q96RK1 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CITED4Q96RK1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CITED4Q96RK1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.84■□□□□ 0.13
CITED4Q96RK1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CITED4Q96RK1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CITED4Q96RK1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CITED4Q96RK1 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.84■□□□□ 0.13
CITED4Q96RK1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.84■□□□□ 0.13
CITED4Q96RK1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CITED4Q96RK1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CITED4Q96RK1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CITED4Q96RK1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CITED4Q96RK1 AP006587.3-201ENST00000525742 1516 ntBASIC15.84■□□□□ 0.13
CITED4Q96RK1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CITED4Q96RK1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.83■□□□□ 0.13
CITED4Q96RK1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CITED4Q96RK1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CITED4Q96RK1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CITED4Q96RK1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CITED4Q96RK1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
CITED4Q96RK1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.13
CITED4Q96RK1 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CITED4Q96RK1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CITED4Q96RK1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CITED4Q96RK1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
CITED4Q96RK1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CITED4Q96RK1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.83■□□□□ 0.12
CITED4Q96RK1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CITED4Q96RK1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CITED4Q96RK1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CITED4Q96RK1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.83■□□□□ 0.12
CITED4Q96RK1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.83■□□□□ 0.12
CITED4Q96RK1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.83■□□□□ 0.12
CITED4Q96RK1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.83■□□□□ 0.12
CITED4Q96RK1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.83■□□□□ 0.12
CITED4Q96RK1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.83■□□□□ 0.12
CITED4Q96RK1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.83■□□□□ 0.12
CITED4Q96RK1 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.83■□□□□ 0.12
CITED4Q96RK1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CITED4Q96RK1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CITED4Q96RK1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CITED4Q96RK1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CITED4Q96RK1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.83■□□□□ 0.12
CITED4Q96RK1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.83■□□□□ 0.12
CITED4Q96RK1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.83■□□□□ 0.12
CITED4Q96RK1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CITED4Q96RK1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CITED4Q96RK1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CITED4Q96RK1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CITED4Q96RK1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CITED4Q96RK1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.83■□□□□ 0.12
CITED4Q96RK1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CITED4Q96RK1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
CITED4Q96RK1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CITED4Q96RK1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.82■□□□□ 0.12
CITED4Q96RK1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.82■□□□□ 0.12
CITED4Q96RK1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.82■□□□□ 0.12
CITED4Q96RK1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.82■□□□□ 0.12
CITED4Q96RK1 AC079416.2-201ENST00000625035 1193 ntBASIC15.82■□□□□ 0.12
CITED4Q96RK1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CITED4Q96RK1 LINC02199-201ENST00000506655 2702 ntBASIC15.82■□□□□ 0.12
CITED4Q96RK1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.82■□□□□ 0.12
CITED4Q96RK1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.82■□□□□ 0.12
CITED4Q96RK1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms