Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 SLC25A3P1-201ENST00000443844 931 ntBASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 AC007613.1-201ENST00000572811 2597 ntBASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 AC009102.3-201ENST00000623118 1491 ntBASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 MIR149-201ENST00000384879 89 ntBASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 SEC1P-202ENST00000473944 940 ntBASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 NEK4P2-201ENST00000580004 1012 ntBASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 AC097493.4-201ENST00000641197 219 ntBASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 ABALON-201ENST00000629058 1903 ntBASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSPG4P5Q96PW8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 AC093677.2-201ENST00000600169 1863 ntBASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 AC024243.1-201ENST00000609234 778 ntBASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 AL138966.2-201ENST00000621997 464 ntBASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CSPG4P5Q96PW8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CSPG4P5Q96PW8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSPG4P5Q96PW8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CSPG4P5Q96PW8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.02■□□□□ 0.64
CSPG4P5Q96PW8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CSPG4P5Q96PW8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms