Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2E2Q96LR5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2E2Q96LR5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.32□□□□□ -0.12
UBE2E2Q96LR5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2E2Q96LR5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2E2Q96LR5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2E2Q96LR5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
UBE2E2Q96LR5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2E2Q96LR5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2E2Q96LR5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.32□□□□□ -0.12
UBE2E2Q96LR5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2E2Q96LR5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.32□□□□□ -0.12
UBE2E2Q96LR5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2E2Q96LR5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 PCED1CP-201ENST00000419887 785 ntBASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 AL163051.1-201ENST00000569214 1512 ntBASIC14.31□□□□□ -0.12
UBE2E2Q96LR5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 AC093525.10-201ENST00000625130 1569 ntBASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 AL391807.1-203ENST00000604392 2365 ntBASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 HLA-F-220ENST00000434407 884 ntBASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 AC092597.1-201ENST00000487352 616 ntBASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 AL358472.4-201ENST00000633140 710 ntBASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 MYLKP1-201ENST00000509077 1580 ntBASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
UBE2E2Q96LR5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.29□□□□□ -0.12
UBE2E2Q96LR5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.29□□□□□ -0.12
UBE2E2Q96LR5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2E2Q96LR5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
UBE2E2Q96LR5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2E2Q96LR5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2E2Q96LR5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2E2Q96LR5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2E2Q96LR5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2E2Q96LR5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2E2Q96LR5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.29□□□□□ -0.12
UBE2E2Q96LR5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.29□□□□□ -0.12
UBE2E2Q96LR5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2E2Q96LR5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms