Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 AC073508.3-201ENST00000619697 1419 ntBASIC16.28■□□□□ 0.2
TMEM54Q969K7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM54Q969K7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM54Q969K7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TMEM54Q969K7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEM54Q969K7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM54Q969K7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM54Q969K7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM54Q969K7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM54Q969K7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TMEM54Q969K7 GMCL1P1-201ENST00000463439 1581 ntBASIC16.27■□□□□ 0.2
TMEM54Q969K7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM54Q969K7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.27■□□□□ 0.2
TMEM54Q969K7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TMEM54Q969K7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.27■□□□□ 0.2
TMEM54Q969K7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM54Q969K7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM54Q969K7 MIR3917-201ENST00000580971 93 ntBASIC16.27■□□□□ 0.2
TMEM54Q969K7 AC092865.7-201ENST00000641832 219 ntBASIC16.27■□□□□ 0.2
TMEM54Q969K7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM54Q969K7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM54Q969K7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM54Q969K7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.27■□□□□ 0.19
TMEM54Q969K7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TMEM54Q969K7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.27■□□□□ 0.19
TMEM54Q969K7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM54Q969K7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM54Q969K7 AL354751.1-201ENST00000412768 1863 ntBASIC16.27■□□□□ 0.19
TMEM54Q969K7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM54Q969K7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM54Q969K7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM54Q969K7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM54Q969K7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TMEM54Q969K7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM54Q969K7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM54Q969K7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM54Q969K7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM54Q969K7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM54Q969K7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM54Q969K7 AC005521.1-201ENST00000393351 872 ntBASIC16.26■□□□□ 0.19
TMEM54Q969K7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.26■□□□□ 0.19
TMEM54Q969K7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TMEM54Q969K7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM54Q969K7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM54Q969K7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM54Q969K7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM54Q969K7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TMEM54Q969K7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM54Q969K7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM54Q969K7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM54Q969K7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM54Q969K7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TMEM54Q969K7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM54Q969K7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TMEM54Q969K7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM54Q969K7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM54Q969K7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM54Q969K7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM54Q969K7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM54Q969K7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM54Q969K7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TMEM54Q969K7 AC093677.2-201ENST00000600169 1863 ntBASIC16.25■□□□□ 0.19
TMEM54Q969K7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM54Q969K7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM54Q969K7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM54Q969K7 ESPNP-201ENST00000270691 2015 ntBASIC16.25■□□□□ 0.19
TMEM54Q969K7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM54Q969K7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM54Q969K7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM54Q969K7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM54Q969K7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.25■□□□□ 0.19
TMEM54Q969K7 BX664615.1-201ENST00000443558 458 ntBASIC16.25■□□□□ 0.19
TMEM54Q969K7 COX11P1-201ENST00000489116 835 ntBASIC16.25■□□□□ 0.19
TMEM54Q969K7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM54Q969K7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TMEM54Q969K7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM54Q969K7 GCSHP2-201ENST00000560971 527 ntBASIC16.25■□□□□ 0.19
TMEM54Q969K7 AC140113.3-201ENST00000605663 199 ntBASIC16.25■□□□□ 0.19
TMEM54Q969K7 AL023973.1-201ENST00000624619 620 ntBASIC16.25■□□□□ 0.19
TMEM54Q969K7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TMEM54Q969K7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TMEM54Q969K7 AL031432.5-201ENST00000641059 760 ntBASIC16.25■□□□□ 0.19
TMEM54Q969K7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM54Q969K7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM54Q969K7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM54Q969K7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TMEM54Q969K7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TMEM54Q969K7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
TMEM54Q969K7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TMEM54Q969K7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM54Q969K7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM54Q969K7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM54Q969K7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM54Q969K7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
TMEM54Q969K7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TMEM54Q969K7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms