Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SMARCC1Q92922 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.58■■□□□ 1.37
SMARCC1Q92922 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC23.58■■□□□ 1.37
SMARCC1Q92922 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SMARCC1Q92922 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SMARCC1Q92922 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.58■■□□□ 1.36
SMARCC1Q92922 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMARCC1Q92922 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.57■■□□□ 1.36
SMARCC1Q92922 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SMARCC1Q92922 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SMARCC1Q92922 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMARCC1Q92922 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMARCC1Q92922 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC23.57■■□□□ 1.36
SMARCC1Q92922 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC23.57■■□□□ 1.36
SMARCC1Q92922 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC23.57■■□□□ 1.36
SMARCC1Q92922 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMARCC1Q92922 SLC25A24-204ENST00000569674 2357 ntBASIC23.57■■□□□ 1.36
SMARCC1Q92922 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SMARCC1Q92922 NFYC-AS1-201ENST00000606277 1687 ntBASIC23.57■■□□□ 1.36
SMARCC1Q92922 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC23.57■■□□□ 1.36
SMARCC1Q92922 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.57■■□□□ 1.36
SMARCC1Q92922 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC23.57■■□□□ 1.36
SMARCC1Q92922 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMARCC1Q92922 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMARCC1Q92922 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC23.57■■□□□ 1.36
SMARCC1Q92922 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SMARCC1Q92922 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC23.57■■□□□ 1.36
SMARCC1Q92922 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMARCC1Q92922 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
SMARCC1Q92922 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
SMARCC1Q92922 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.56■■□□□ 1.36
SMARCC1Q92922 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SMARCC1Q92922 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.56■■□□□ 1.36
SMARCC1Q92922 ASL-204ENST00000395331 1538 ntTSL 5 BASIC23.56■■□□□ 1.36
SMARCC1Q92922 MTMR9LP-203ENST00000426597 1545 ntBASIC23.56■■□□□ 1.36
SMARCC1Q92922 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMARCC1Q92922 AC005104.2-201ENST00000427818 678 ntBASIC23.56■■□□□ 1.36
SMARCC1Q92922 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC23.56■■□□□ 1.36
SMARCC1Q92922 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC23.56■■□□□ 1.36
SMARCC1Q92922 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SMARCC1Q92922 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SMARCC1Q92922 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC23.56■■□□□ 1.36
SMARCC1Q92922 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
SMARCC1Q92922 INTS4P1-201ENST00000438455 1935 ntBASIC23.56■■□□□ 1.36
SMARCC1Q92922 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC23.56■■□□□ 1.36
SMARCC1Q92922 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCC1Q92922 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCC1Q92922 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.55■■□□□ 1.36
SMARCC1Q92922 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCC1Q92922 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCC1Q92922 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCC1Q92922 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCC1Q92922 MEG3-211ENST00000452514 461 ntTSL 3 BASIC23.55■■□□□ 1.36
SMARCC1Q92922 PGAM5P1-201ENST00000518923 814 ntBASIC23.55■■□□□ 1.36
SMARCC1Q92922 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC23.55■■□□□ 1.36
SMARCC1Q92922 CD63-204ENST00000546939 779 ntTSL 3 BASIC23.55■■□□□ 1.36
SMARCC1Q92922 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC23.55■■□□□ 1.36
SMARCC1Q92922 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCC1Q92922 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.55■■□□□ 1.36
SMARCC1Q92922 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC23.55■■□□□ 1.36
SMARCC1Q92922 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCC1Q92922 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCC1Q92922 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCC1Q92922 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
SMARCC1Q92922 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCC1Q92922 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCC1Q92922 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SMARCC1Q92922 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC1Q92922 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC1Q92922 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SMARCC1Q92922 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC1Q92922 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC1Q92922 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC23.54■■□□□ 1.36
SMARCC1Q92922 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC23.54■■□□□ 1.36
SMARCC1Q92922 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC1Q92922 IGHV3-22-201ENST00000520721 359 ntBASIC23.54■■□□□ 1.36
SMARCC1Q92922 AC027601.4-201ENST00000611259 610 ntBASIC23.54■■□□□ 1.36
SMARCC1Q92922 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC1Q92922 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC23.54■■□□□ 1.36
SMARCC1Q92922 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC1Q92922 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC1Q92922 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC23.54■■□□□ 1.36
SMARCC1Q92922 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SMARCC1Q92922 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC1Q92922 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC1Q92922 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
SMARCC1Q92922 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC1Q92922 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
SMARCC1Q92922 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC1Q92922 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.53■■□□□ 1.36
SMARCC1Q92922 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC1Q92922 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC1Q92922 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC1Q92922 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC23.53■■□□□ 1.36
SMARCC1Q92922 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC1Q92922 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC23.53■■□□□ 1.36
SMARCC1Q92922 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC23.53■■□□□ 1.36
SMARCC1Q92922 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC1Q92922 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC23.53■■□□□ 1.36
SMARCC1Q92922 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms