Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.88■□□□□ 0.77
SEMA4DQ92854 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.88■□□□□ 0.77
SEMA4DQ92854 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.88■□□□□ 0.77
SEMA4DQ92854 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.88■□□□□ 0.77
SEMA4DQ92854 AC010240.3-201ENST00000607688 395 ntBASIC19.88■□□□□ 0.77
SEMA4DQ92854 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA4DQ92854 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SEMA4DQ92854 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.88■□□□□ 0.77
SEMA4DQ92854 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA4DQ92854 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.88■□□□□ 0.77
SEMA4DQ92854 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.87■□□□□ 0.77
SEMA4DQ92854 AC135776.1-201ENST00000319817 2481 ntBASIC19.87■□□□□ 0.77
SEMA4DQ92854 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.87■□□□□ 0.77
SEMA4DQ92854 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.87■□□□□ 0.77
SEMA4DQ92854 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.87■□□□□ 0.77
SEMA4DQ92854 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.87■□□□□ 0.77
SEMA4DQ92854 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.87■□□□□ 0.77
SEMA4DQ92854 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SEMA4DQ92854 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SEMA4DQ92854 LIN28AP1-201ENST00000429574 405 ntBASIC19.87■□□□□ 0.77
SEMA4DQ92854 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.87■□□□□ 0.77
SEMA4DQ92854 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.87■□□□□ 0.77
SEMA4DQ92854 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 KRT18P57-201ENST00000443599 1254 ntBASIC19.87■□□□□ 0.77
SEMA4DQ92854 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.87■□□□□ 0.77
SEMA4DQ92854 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.87■□□□□ 0.77
SEMA4DQ92854 GCSHP2-201ENST00000560971 527 ntBASIC19.87■□□□□ 0.77
SEMA4DQ92854 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA4DQ92854 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SEMA4DQ92854 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.87■□□□□ 0.77
SEMA4DQ92854 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.87■□□□□ 0.77
SEMA4DQ92854 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
SEMA4DQ92854 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SEMA4DQ92854 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA4DQ92854 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA4DQ92854 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA4DQ92854 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.86■□□□□ 0.77
SEMA4DQ92854 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA4DQ92854 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA4DQ92854 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SEMA4DQ92854 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.86■□□□□ 0.77
SEMA4DQ92854 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.86■□□□□ 0.77
SEMA4DQ92854 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.86■□□□□ 0.77
SEMA4DQ92854 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.86■□□□□ 0.77
SEMA4DQ92854 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.86■□□□□ 0.77
SEMA4DQ92854 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SEMA4DQ92854 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SEMA4DQ92854 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.86■□□□□ 0.77
SEMA4DQ92854 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.86■□□□□ 0.77
SEMA4DQ92854 AL354751.1-201ENST00000412768 1863 ntBASIC19.86■□□□□ 0.77
SEMA4DQ92854 AC007613.1-201ENST00000572811 2597 ntBASIC19.86■□□□□ 0.77
SEMA4DQ92854 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SEMA4DQ92854 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4DQ92854 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.85■□□□□ 0.77
SEMA4DQ92854 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4DQ92854 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.85■□□□□ 0.77
SEMA4DQ92854 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4DQ92854 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4DQ92854 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4DQ92854 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4DQ92854 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4DQ92854 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.85■□□□□ 0.77
SEMA4DQ92854 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4DQ92854 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4DQ92854 MIR149-201ENST00000384879 89 ntBASIC19.85■□□□□ 0.77
SEMA4DQ92854 ATP5G1P1-201ENST00000448724 379 ntBASIC19.85■□□□□ 0.77
SEMA4DQ92854 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4DQ92854 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4DQ92854 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SEMA4DQ92854 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
SEMA4DQ92854 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.85■□□□□ 0.77
SEMA4DQ92854 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.85■□□□□ 0.77
SEMA4DQ92854 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.85■□□□□ 0.77
SEMA4DQ92854 AL441883.1-201ENST00000566170 1045 ntBASIC19.85■□□□□ 0.77
SEMA4DQ92854 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.85■□□□□ 0.77
SEMA4DQ92854 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4DQ92854 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.85■□□□□ 0.77
SEMA4DQ92854 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4DQ92854 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.85■□□□□ 0.77
SEMA4DQ92854 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4DQ92854 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.85■□□□□ 0.77
SEMA4DQ92854 AC009102.3-201ENST00000623118 1491 ntBASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms