Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 MTMR9LP-203ENST00000426597 1545 ntBASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 AC073621.1-201ENST00000392730 636 ntBASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 AL645939.2-201ENST00000427340 991 ntBASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 AC027612.4-201ENST00000605371 583 ntBASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 Z98044.1-201ENST00000632503 1764 ntBASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 AC105339.3-201ENST00000560043 636 ntBASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 AC008735.5-201ENST00000623544 497 ntBASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 AP002414.3-201ENST00000589352 1468 ntBASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 AC113404.2-201ENST00000507884 177 ntBASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 AL513190.1-201ENST00000621254 727 ntBASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.4□□□□□ -0.42
ALMS1Q8TCU4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.4□□□□□ -0.43
ALMS1Q8TCU4 AL139400.1-201ENST00000366220 510 ntBASIC12.4□□□□□ -0.43
ALMS1Q8TCU4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.4□□□□□ -0.43
ALMS1Q8TCU4 KRT18P2-201ENST00000447938 1258 ntBASIC12.4□□□□□ -0.43
ALMS1Q8TCU4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ALMS1Q8TCU4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 IRX1P1-201ENST00000438849 1838 ntBASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 MIR149-201ENST00000384879 89 ntBASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ALMS1Q8TCU4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms