Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 BICD1-207ENST00000551848 1962 ntBASIC20.12■□□□□ 0.81
LNX1Q8TBB1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 AL023284.2-201ENST00000405850 579 ntBASIC20.12■□□□□ 0.81
LNX1Q8TBB1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 ZNF444P1-201ENST00000559497 298 ntBASIC20.12■□□□□ 0.81
LNX1Q8TBB1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LNX1Q8TBB1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 AL499627.1-201ENST00000569373 2188 ntBASIC20.11■□□□□ 0.81
LNX1Q8TBB1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LNX1Q8TBB1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 LINC01311-201ENST00000565162 1445 ntBASIC20.1■□□□□ 0.81
LNX1Q8TBB1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 VENTXP5-201ENST00000523979 775 ntBASIC20.1■□□□□ 0.81
LNX1Q8TBB1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
LNX1Q8TBB1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
LNX1Q8TBB1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LNX1Q8TBB1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LNX1Q8TBB1 AL390961.4-201ENST00000623958 2535 ntBASIC20.09■□□□□ 0.81
LNX1Q8TBB1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LNX1Q8TBB1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LNX1Q8TBB1 KRT18P56-201ENST00000507275 550 ntBASIC20.09■□□□□ 0.81
LNX1Q8TBB1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.09■□□□□ 0.81
LNX1Q8TBB1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
LNX1Q8TBB1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms