Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 AC139713.2-201ENST00000641328 2723 ntBASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 AC133681.1-201ENST00000465482 601 ntBASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 RCC2P6-201ENST00000526625 1557 ntBASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 MTMR9LP-203ENST00000426597 1545 ntBASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.28■□□□□ 0.2
DNAAF1Q8NEP3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 KRASP1-201ENST00000407852 552 ntBASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 KRT18P6-201ENST00000555540 1265 ntBASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 KRT8P41-201ENST00000533985 1514 ntBASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 ESPNP-201ENST00000270691 2015 ntBASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.27■□□□□ 0.2
DNAAF1Q8NEP3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.27■□□□□ 0.19
DNAAF1Q8NEP3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
DNAAF1Q8NEP3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
DNAAF1Q8NEP3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
DNAAF1Q8NEP3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.19
DNAAF1Q8NEP3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
DNAAF1Q8NEP3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
DNAAF1Q8NEP3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
DNAAF1Q8NEP3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.27■□□□□ 0.19
DNAAF1Q8NEP3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DNAAF1Q8NEP3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.27■□□□□ 0.19
DNAAF1Q8NEP3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 AC233263.1-201ENST00000578059 224 ntBASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 AL445675.2-201ENST00000620291 557 ntBASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 AL023875.1-201ENST00000640777 796 ntBASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNAAF1Q8NEP3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms