Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 AC009113.1-201ENST00000570267 2443 ntBASIC16.16■□□□□ 0.18
CPEB3Q8NE35 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.16■□□□□ 0.18
CPEB3Q8NE35 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 MYC-208ENST00000641036 567 ntBASIC16.16■□□□□ 0.18
CPEB3Q8NE35 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 KRT8P50-201ENST00000562022 1438 ntBASIC16.16■□□□□ 0.18
CPEB3Q8NE35 HOXB1-202ENST00000577092 1414 ntBASIC16.16■□□□□ 0.18
CPEB3Q8NE35 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 MYLKP1-201ENST00000509077 1580 ntBASIC16.16■□□□□ 0.18
CPEB3Q8NE35 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.16■□□□□ 0.18
CPEB3Q8NE35 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 AC113347.1-201ENST00000413321 391 ntBASIC16.15■□□□□ 0.18
CPEB3Q8NE35 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 KRT18P23-201ENST00000435622 1283 ntBASIC16.15■□□□□ 0.18
CPEB3Q8NE35 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 LETM1P2-201ENST00000597330 2178 ntBASIC16.15■□□□□ 0.18
CPEB3Q8NE35 AC141257.4-201ENST00000634557 245 ntBASIC16.15■□□□□ 0.18
CPEB3Q8NE35 AC136944.6-201ENST00000634818 245 ntBASIC16.15■□□□□ 0.18
CPEB3Q8NE35 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPEB3Q8NE35 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CPEB3Q8NE35 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPEB3Q8NE35 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPEB3Q8NE35 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPEB3Q8NE35 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.14■□□□□ 0.17
CPEB3Q8NE35 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CPEB3Q8NE35 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPEB3Q8NE35 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPEB3Q8NE35 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPEB3Q8NE35 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.14■□□□□ 0.17
CPEB3Q8NE35 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPEB3Q8NE35 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPEB3Q8NE35 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPEB3Q8NE35 TERF1P1-201ENST00000311003 1181 ntBASIC16.14■□□□□ 0.17
CPEB3Q8NE35 LIN28AP1-201ENST00000429574 405 ntBASIC16.14■□□□□ 0.17
CPEB3Q8NE35 AL137013.1-201ENST00000432946 1228 ntBASIC16.14■□□□□ 0.17
CPEB3Q8NE35 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.14■□□□□ 0.17
CPEB3Q8NE35 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.14■□□□□ 0.17
CPEB3Q8NE35 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.14■□□□□ 0.17
CPEB3Q8NE35 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.14■□□□□ 0.17
CPEB3Q8NE35 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.14■□□□□ 0.17
CPEB3Q8NE35 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPEB3Q8NE35 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms