Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
CFAP43Q8NDM7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC28.85■■■□□ 2.21
CFAP43Q8NDM7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
CFAP43Q8NDM7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC28.85■■■□□ 2.21
CFAP43Q8NDM7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CFAP43Q8NDM7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CFAP43Q8NDM7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC28.84■■■□□ 2.21
CFAP43Q8NDM7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CFAP43Q8NDM7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CFAP43Q8NDM7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CFAP43Q8NDM7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC28.84■■■□□ 2.21
CFAP43Q8NDM7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC28.84■■■□□ 2.21
CFAP43Q8NDM7 AL691403.2-201ENST00000618460 490 ntBASIC28.84■■■□□ 2.21
CFAP43Q8NDM7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CFAP43Q8NDM7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC28.84■■■□□ 2.21
CFAP43Q8NDM7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
CFAP43Q8NDM7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CFAP43Q8NDM7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CFAP43Q8NDM7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC28.83■■■□□ 2.21
CFAP43Q8NDM7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC28.83■■■□□ 2.21
CFAP43Q8NDM7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CFAP43Q8NDM7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC28.83■■■□□ 2.21
CFAP43Q8NDM7 AC140113.2-201ENST00000604370 208 ntBASIC28.83■■■□□ 2.21
CFAP43Q8NDM7 AL139424.1-201ENST00000607572 797 ntBASIC28.83■■■□□ 2.21
CFAP43Q8NDM7 IGHV3-41-201ENST00000613121 348 ntBASIC28.83■■■□□ 2.21
CFAP43Q8NDM7 AC055717.3-201ENST00000622967 595 ntBASIC28.83■■■□□ 2.21
CFAP43Q8NDM7 KRT89P-201ENST00000620027 1478 ntBASIC28.83■■■□□ 2.21
CFAP43Q8NDM7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CFAP43Q8NDM7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC28.83■■■□□ 2.21
CFAP43Q8NDM7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CFAP43Q8NDM7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC28.83■■■□□ 2.21
CFAP43Q8NDM7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC28.83■■■□□ 2.21
CFAP43Q8NDM7 GUSBP12-201ENST00000513727 720 ntBASIC28.83■■■□□ 2.21
CFAP43Q8NDM7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC28.83■■■□□ 2.21
CFAP43Q8NDM7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CFAP43Q8NDM7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CFAP43Q8NDM7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
CFAP43Q8NDM7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CFAP43Q8NDM7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC28.82■■■□□ 2.2
CFAP43Q8NDM7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CFAP43Q8NDM7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CFAP43Q8NDM7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CFAP43Q8NDM7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CFAP43Q8NDM7 AC098831.1-202ENST00000438821 336 ntBASIC28.82■■■□□ 2.2
CFAP43Q8NDM7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC28.82■■■□□ 2.2
CFAP43Q8NDM7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CFAP43Q8NDM7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC28.82■■■□□ 2.2
CFAP43Q8NDM7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC28.82■■■□□ 2.2
CFAP43Q8NDM7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
CFAP43Q8NDM7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CFAP43Q8NDM7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CFAP43Q8NDM7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 RPL13AP23-201ENST00000480739 586 ntBASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 AC116562.4-201ENST00000641316 2276 ntBASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CFAP43Q8NDM7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CFAP43Q8NDM7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CFAP43Q8NDM7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC28.8■■■□□ 2.2
CFAP43Q8NDM7 AC093909.1-201ENST00000504731 1122 ntBASIC28.8■■■□□ 2.2
CFAP43Q8NDM7 IGHV3-22-201ENST00000520721 359 ntBASIC28.8■■■□□ 2.2
CFAP43Q8NDM7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC28.8■■■□□ 2.2
CFAP43Q8NDM7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CFAP43Q8NDM7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC28.8■■■□□ 2.2
CFAP43Q8NDM7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CFAP43Q8NDM7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CFAP43Q8NDM7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CFAP43Q8NDM7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CFAP43Q8NDM7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC28.8■■■□□ 2.2
CFAP43Q8NDM7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC28.8■■■□□ 2.2
CFAP43Q8NDM7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC28.8■■■□□ 2.2
CFAP43Q8NDM7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CFAP43Q8NDM7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC28.79■■■□□ 2.2
CFAP43Q8NDM7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CFAP43Q8NDM7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
CFAP43Q8NDM7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC28.79■■■□□ 2.2
CFAP43Q8NDM7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CFAP43Q8NDM7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC28.79■■■□□ 2.2
CFAP43Q8NDM7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CFAP43Q8NDM7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC28.79■■■□□ 2.2
CFAP43Q8NDM7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC28.79■■■□□ 2.2
CFAP43Q8NDM7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC28.79■■■□□ 2.2
CFAP43Q8NDM7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC28.79■■■□□ 2.2
CFAP43Q8NDM7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC28.79■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms