Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 SPDYE15P-201ENST00000424157 909 ntBASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 AC104390.1-201ENST00000555663 520 ntBASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 AL357033.4-201ENST00000617703 1807 ntBASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 Z98044.1-201ENST00000632503 1764 ntBASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH20Q8N6Y1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 AC006333.2-201ENST00000607957 2099 ntBASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 AL138781.2-201ENST00000617896 1843 ntBASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 AL031133.1-201ENST00000406807 723 ntBASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 AL671277.2-201ENST00000458060 996 ntBASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 RASA4DP-201ENST00000460726 1199 ntBASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH20Q8N6Y1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 AC112907.2-201ENST00000448639 330 ntBASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms