Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 AC008622.2-201ENST00000617006 1229 ntBASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 AC005332.1-201ENST00000577698 1310 ntBASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 AC083906.6-201ENST00000641366 219 ntBASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC33Q8N5R6 AC009113.1-201ENST00000570267 2443 ntBASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 AL121894.2-201ENST00000602977 491 ntBASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 ANO7L1-203ENST00000602586 1720 ntBASIC19.37■□□□□ 0.69
CCDC33Q8N5R6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 AC112907.2-201ENST00000448639 330 ntBASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 GCSHP2-201ENST00000560971 527 ntBASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 AC099343.3-201ENST00000605834 2503 ntBASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms