Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC25.53■■□□□ 1.68
ARHGEF28Q8N1W1 LINC01126-201ENST00000623515 1646 ntBASIC25.53■■□□□ 1.68
ARHGEF28Q8N1W1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ARHGEF28Q8N1W1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC25.53■■□□□ 1.68
ARHGEF28Q8N1W1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ARHGEF28Q8N1W1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ARHGEF28Q8N1W1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ARHGEF28Q8N1W1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ARHGEF28Q8N1W1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC25.52■■□□□ 1.68
ARHGEF28Q8N1W1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
ARHGEF28Q8N1W1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
ARHGEF28Q8N1W1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC25.52■■□□□ 1.68
ARHGEF28Q8N1W1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC25.52■■□□□ 1.68
ARHGEF28Q8N1W1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC25.52■■□□□ 1.68
ARHGEF28Q8N1W1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
ARHGEF28Q8N1W1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ARHGEF28Q8N1W1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
ARHGEF28Q8N1W1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ARHGEF28Q8N1W1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ARHGEF28Q8N1W1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC25.52■■□□□ 1.68
ARHGEF28Q8N1W1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
ARHGEF28Q8N1W1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
ARHGEF28Q8N1W1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
ARHGEF28Q8N1W1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
ARHGEF28Q8N1W1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
ARHGEF28Q8N1W1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
ARHGEF28Q8N1W1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
ARHGEF28Q8N1W1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC25.51■■□□□ 1.68
ARHGEF28Q8N1W1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF28Q8N1W1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF28Q8N1W1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF28Q8N1W1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF28Q8N1W1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC25.51■■□□□ 1.67
ARHGEF28Q8N1W1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
ARHGEF28Q8N1W1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
ARHGEF28Q8N1W1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF28Q8N1W1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF28Q8N1W1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF28Q8N1W1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF28Q8N1W1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC25.51■■□□□ 1.67
ARHGEF28Q8N1W1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF28Q8N1W1 PENK-208ENST00000523051 772 ntTSL 5 BASIC25.51■■□□□ 1.67
ARHGEF28Q8N1W1 AL662844.1-201ENST00000546340 181 ntBASIC25.51■■□□□ 1.67
ARHGEF28Q8N1W1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF28Q8N1W1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
ARHGEF28Q8N1W1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ARHGEF28Q8N1W1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ARHGEF28Q8N1W1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ARHGEF28Q8N1W1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ARHGEF28Q8N1W1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC25.5■■□□□ 1.67
ARHGEF28Q8N1W1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC25.5■■□□□ 1.67
ARHGEF28Q8N1W1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC25.5■■□□□ 1.67
ARHGEF28Q8N1W1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
ARHGEF28Q8N1W1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC25.5■■□□□ 1.67
ARHGEF28Q8N1W1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ARHGEF28Q8N1W1 MINOS1P3-201ENST00000457048 203 ntBASIC25.5■■□□□ 1.67
ARHGEF28Q8N1W1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC25.5■■□□□ 1.67
ARHGEF28Q8N1W1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC25.5■■□□□ 1.67
ARHGEF28Q8N1W1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC25.5■■□□□ 1.67
ARHGEF28Q8N1W1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
ARHGEF28Q8N1W1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ARHGEF28Q8N1W1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 AL773604.1-201ENST00000617417 272 ntBASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 AC112777.1-201ENST00000540175 1423 ntBASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ARHGEF28Q8N1W1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 AC005082.1-201ENST00000413042 2259 ntBASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms