Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 KRT18P27-201ENST00000427733 1299 ntBASIC15.53■□□□□ 0.08
CSMD2Q7Z408 RNA5SP416-201ENST00000516838 111 ntBASIC15.53■□□□□ 0.08
CSMD2Q7Z408 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 AC138761.1-201ENST00000584393 385 ntBASIC15.53■□□□□ 0.08
CSMD2Q7Z408 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 AC009947.1-201ENST00000444350 727 ntBASIC15.53■□□□□ 0.08
CSMD2Q7Z408 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 AL138831.2-201ENST00000606564 490 ntBASIC15.53■□□□□ 0.08
CSMD2Q7Z408 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 RCN1P2-201ENST00000398357 915 ntBASIC15.52■□□□□ 0.08
CSMD2Q7Z408 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 LINC01006-201ENST00000333319 2292 ntBASIC15.52■□□□□ 0.08
CSMD2Q7Z408 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 AP002472.1-201ENST00000577490 586 ntBASIC15.52■□□□□ 0.08
CSMD2Q7Z408 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD2Q7Z408 AC034236.2-201ENST00000606662 1610 ntBASIC15.52■□□□□ 0.07
CSMD2Q7Z408 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.07
CSMD2Q7Z408 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CSMD2Q7Z408 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.07
CSMD2Q7Z408 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CSMD2Q7Z408 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
CSMD2Q7Z408 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
CSMD2Q7Z408 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.07
CSMD2Q7Z408 AC007274.1-201ENST00000439805 662 ntBASIC15.52■□□□□ 0.07
CSMD2Q7Z408 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.52■□□□□ 0.07
CSMD2Q7Z408 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.52■□□□□ 0.07
CSMD2Q7Z408 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CSMD2Q7Z408 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.52■□□□□ 0.07
CSMD2Q7Z408 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.52■□□□□ 0.07
CSMD2Q7Z408 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
CSMD2Q7Z408 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CSMD2Q7Z408 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.51■□□□□ 0.07
CSMD2Q7Z408 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms