Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RTL4Q6ZR62 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.33■□□□□ 0.37
RTL4Q6ZR62 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTL4Q6ZR62 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RTL4Q6ZR62 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTL4Q6ZR62 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
RTL4Q6ZR62 FEM1AP3-201ENST00000403722 1741 ntBASIC17.33■□□□□ 0.37
RTL4Q6ZR62 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RTL4Q6ZR62 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RTL4Q6ZR62 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
RTL4Q6ZR62 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.33■□□□□ 0.37
RTL4Q6ZR62 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL4Q6ZR62 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTL4Q6ZR62 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL4Q6ZR62 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.33■□□□□ 0.36
RTL4Q6ZR62 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTL4Q6ZR62 AK4P3-201ENST00000418260 669 ntBASIC17.33■□□□□ 0.36
RTL4Q6ZR62 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.33■□□□□ 0.36
RTL4Q6ZR62 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTL4Q6ZR62 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.33■□□□□ 0.36
RTL4Q6ZR62 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.33■□□□□ 0.36
RTL4Q6ZR62 AL031432.5-201ENST00000641059 760 ntBASIC17.33■□□□□ 0.36
RTL4Q6ZR62 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.33■□□□□ 0.36
RTL4Q6ZR62 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL4Q6ZR62 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.33■□□□□ 0.36
RTL4Q6ZR62 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.33■□□□□ 0.36
RTL4Q6ZR62 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
RTL4Q6ZR62 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTL4Q6ZR62 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL4Q6ZR62 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.33■□□□□ 0.36
RTL4Q6ZR62 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.33■□□□□ 0.36
RTL4Q6ZR62 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 AP000523.1-201ENST00000398242 1049 ntBASIC17.32■□□□□ 0.36
RTL4Q6ZR62 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 AC139887.4-201ENST00000607877 719 ntBASIC17.32■□□□□ 0.36
RTL4Q6ZR62 AC008622.2-201ENST00000617006 1229 ntBASIC17.32■□□□□ 0.36
RTL4Q6ZR62 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 Z98044.1-201ENST00000632503 1764 ntBASIC17.32■□□□□ 0.36
RTL4Q6ZR62 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 LTB4R2-202ENST00000528054 3092 ntBASIC17.32■□□□□ 0.36
RTL4Q6ZR62 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL4Q6ZR62 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.31■□□□□ 0.36
RTL4Q6ZR62 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 AC117947.1-201ENST00000427448 529 ntBASIC17.31■□□□□ 0.36
RTL4Q6ZR62 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 LINC01238-205ENST00000567549 1107 ntBASIC17.31■□□□□ 0.36
RTL4Q6ZR62 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 MIR4674-201ENST00000582457 87 ntBASIC17.31■□□□□ 0.36
RTL4Q6ZR62 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 AC093525.10-201ENST00000625130 1569 ntBASIC17.31■□□□□ 0.36
RTL4Q6ZR62 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms