Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC62Q6P9F0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 AC233702.3-201ENST00000578656 1387 ntBASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 AL049812.1-201ENST00000432563 2267 ntBASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 AL732292.2-201ENST00000609649 430 ntBASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 AC083906.6-201ENST00000641366 219 ntBASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC62Q6P9F0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 AP000593.1-201ENST00000393668 712 ntBASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 IFNL4P1-201ENST00000607083 540 ntBASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC62Q6P9F0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 AC004870.1-201ENST00000315132 882 ntBASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 FAAHP1-202ENST00000446499 1238 ntBASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 FDX1P1-201ENST00000449115 551 ntBASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 AL592071.1-201ENST00000611956 408 ntBASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 AL353692.3-201ENST00000407031 1396 ntBASIC20.72■□□□□ 0.91
CCDC62Q6P9F0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 KRT17P6-201ENST00000453795 1220 ntBASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 FOSL1P1-201ENST00000511041 816 ntBASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 AC005332.7-201ENST00000614046 2005 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms