Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 MIR3180-5-201ENST00000583743 153 ntBASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 FAM197Y4-202ENST00000622692 608 ntBASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 AC099343.3-201ENST00000605834 2503 ntBASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKAL1Q5VV42 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 AL163051.1-201ENST00000569214 1512 ntBASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKAL1Q5VV42 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKAL1Q5VV42 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDKAL1Q5VV42 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CDKAL1Q5VV42 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CDKAL1Q5VV42 AC097488.1-201ENST00000507834 756 ntBASIC20.21■□□□□ 0.83
CDKAL1Q5VV42 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.21■□□□□ 0.83
CDKAL1Q5VV42 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDKAL1Q5VV42 ITM2C-210ENST00000620962 501 ntBASIC20.21■□□□□ 0.83
CDKAL1Q5VV42 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDKAL1Q5VV42 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKAL1Q5VV42 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKAL1Q5VV42 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKAL1Q5VV42 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.21■□□□□ 0.83
CDKAL1Q5VV42 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDKAL1Q5VV42 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CDKAL1Q5VV42 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.21■□□□□ 0.83
CDKAL1Q5VV42 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms