Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.69□□□□□ -0.06
FAM78BQ5VT40 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
FAM78BQ5VT40 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 AC084018.2-201ENST00000613093 2607 ntBASIC14.68□□□□□ -0.06
FAM78BQ5VT40 SIRPAP1-201ENST00000448467 1770 ntBASIC14.68□□□□□ -0.06
FAM78BQ5VT40 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 AC098934.4-201ENST00000564127 592 ntBASIC14.68□□□□□ -0.06
FAM78BQ5VT40 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 AC133041.1-202ENST00000642053 222 ntBASIC14.68□□□□□ -0.06
FAM78BQ5VT40 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 AC092368.3-202ENST00000574180 1591 ntBASIC14.68□□□□□ -0.06
FAM78BQ5VT40 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 LINC00896-202ENST00000609602 2128 ntBASIC14.68□□□□□ -0.06
FAM78BQ5VT40 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM78BQ5VT40 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 MYC-209ENST00000641252 345 ntBASIC14.67□□□□□ -0.06
FAM78BQ5VT40 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.67□□□□□ -0.06
FAM78BQ5VT40 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FAM78BQ5VT40 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FAM78BQ5VT40 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FAM78BQ5VT40 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FAM78BQ5VT40 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.66□□□□□ -0.06
FAM78BQ5VT40 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FAM78BQ5VT40 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.66□□□□□ -0.06
FAM78BQ5VT40 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FAM78BQ5VT40 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.66□□□□□ -0.06
FAM78BQ5VT40 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
FAM78BQ5VT40 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FAM78BQ5VT40 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FAM78BQ5VT40 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
FAM78BQ5VT40 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.66□□□□□ -0.06
FAM78BQ5VT40 HLA-B-256ENST00000639848 1089 ntBASIC14.66□□□□□ -0.06
FAM78BQ5VT40 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FAM78BQ5VT40 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms