Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4BQ5SQS7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.34■□□□□ 0.53
SH2D4BQ5SQS7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SH2D4BQ5SQS7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4BQ5SQS7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4BQ5SQS7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4BQ5SQS7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SH2D4BQ5SQS7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.34■□□□□ 0.53
SH2D4BQ5SQS7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.34■□□□□ 0.53
SH2D4BQ5SQS7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.34■□□□□ 0.53
SH2D4BQ5SQS7 MTMR9LP-203ENST00000426597 1545 ntBASIC18.33■□□□□ 0.53
SH2D4BQ5SQS7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH2D4BQ5SQS7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH2D4BQ5SQS7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.33■□□□□ 0.53
SH2D4BQ5SQS7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.33■□□□□ 0.53
SH2D4BQ5SQS7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SH2D4BQ5SQS7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SH2D4BQ5SQS7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 UNC93B5-201ENST00000530315 699 ntBASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 AC012313.1-201ENST00000593393 3059 ntBASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4BQ5SQS7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 AC139713.2-201ENST00000641328 2723 ntBASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 AC067852.2-201ENST00000590513 2313 ntBASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4BQ5SQS7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4BQ5SQS7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4BQ5SQS7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SH2D4BQ5SQS7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
SH2D4BQ5SQS7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4BQ5SQS7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4BQ5SQS7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.31■□□□□ 0.52
SH2D4BQ5SQS7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.31■□□□□ 0.52
SH2D4BQ5SQS7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.31■□□□□ 0.52
SH2D4BQ5SQS7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4BQ5SQS7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.31■□□□□ 0.52
SH2D4BQ5SQS7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4BQ5SQS7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4BQ5SQS7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms