Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.19■□□□□ 0.98
USH1GQ495M9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
USH1GQ495M9 AC005082.1-201ENST00000413042 2259 ntBASIC21.18■□□□□ 0.98
USH1GQ495M9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
USH1GQ495M9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.18■□□□□ 0.98
USH1GQ495M9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.18■□□□□ 0.98
USH1GQ495M9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USH1GQ495M9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.18■□□□□ 0.98
USH1GQ495M9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USH1GQ495M9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USH1GQ495M9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
USH1GQ495M9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USH1GQ495M9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.18■□□□□ 0.98
USH1GQ495M9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.18■□□□□ 0.98
USH1GQ495M9 KRT8P26-201ENST00000534154 1276 ntBASIC21.18■□□□□ 0.98
USH1GQ495M9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.18■□□□□ 0.98
USH1GQ495M9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.18■□□□□ 0.98
USH1GQ495M9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.18■□□□□ 0.98
USH1GQ495M9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.18■□□□□ 0.98
USH1GQ495M9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USH1GQ495M9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USH1GQ495M9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
USH1GQ495M9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.18■□□□□ 0.98
USH1GQ495M9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USH1GQ495M9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.18■□□□□ 0.98
USH1GQ495M9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
USH1GQ495M9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
USH1GQ495M9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
USH1GQ495M9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USH1GQ495M9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USH1GQ495M9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USH1GQ495M9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USH1GQ495M9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.18■□□□□ 0.98
USH1GQ495M9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
USH1GQ495M9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
USH1GQ495M9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
USH1GQ495M9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
USH1GQ495M9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
USH1GQ495M9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USH1GQ495M9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.17■□□□□ 0.98
USH1GQ495M9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
USH1GQ495M9 RNF165-205ENST00000588679 2904 ntBASIC21.17■□□□□ 0.98
USH1GQ495M9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
USH1GQ495M9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USH1GQ495M9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
USH1GQ495M9 KRT18P48-201ENST00000434763 852 ntBASIC21.17■□□□□ 0.98
USH1GQ495M9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.17■□□□□ 0.98
USH1GQ495M9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.17■□□□□ 0.98
USH1GQ495M9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
USH1GQ495M9 AC005332.3-201ENST00000589904 676 ntBASIC21.17■□□□□ 0.98
USH1GQ495M9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.17■□□□□ 0.98
USH1GQ495M9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
USH1GQ495M9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.17■□□□□ 0.98
USH1GQ495M9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USH1GQ495M9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USH1GQ495M9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USH1GQ495M9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
USH1GQ495M9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USH1GQ495M9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.16■□□□□ 0.98
USH1GQ495M9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
USH1GQ495M9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.16■□□□□ 0.98
USH1GQ495M9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USH1GQ495M9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
USH1GQ495M9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
USH1GQ495M9 MYLKP1-201ENST00000509077 1580 ntBASIC21.16■□□□□ 0.98
USH1GQ495M9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USH1GQ495M9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
USH1GQ495M9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USH1GQ495M9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USH1GQ495M9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USH1GQ495M9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USH1GQ495M9 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USH1GQ495M9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USH1GQ495M9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.16■□□□□ 0.98
USH1GQ495M9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.16■□□□□ 0.98
USH1GQ495M9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.16■□□□□ 0.98
USH1GQ495M9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.16■□□□□ 0.98
USH1GQ495M9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.16■□□□□ 0.98
USH1GQ495M9 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.16■□□□□ 0.98
USH1GQ495M9 AC024563.2-201ENST00000603282 481 ntBASIC21.16■□□□□ 0.98
USH1GQ495M9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USH1GQ495M9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USH1GQ495M9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.15■□□□□ 0.98
USH1GQ495M9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USH1GQ495M9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.15■□□□□ 0.98
USH1GQ495M9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USH1GQ495M9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
USH1GQ495M9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USH1GQ495M9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
USH1GQ495M9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
USH1GQ495M9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
USH1GQ495M9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.15■□□□□ 0.98
USH1GQ495M9 AP002383.4-201ENST00000442518 975 ntBASIC21.15■□□□□ 0.98
USH1GQ495M9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.15■□□□□ 0.98
USH1GQ495M9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USH1GQ495M9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
USH1GQ495M9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.15■□□□□ 0.98
USH1GQ495M9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.15■□□□□ 0.98
USH1GQ495M9 AC012313.10-201ENST00000623509 926 ntBASIC21.15■□□□□ 0.98
USH1GQ495M9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms