Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-BQ31612 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-BQ31612 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-BQ31612 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HLA-BQ31612 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HLA-BQ31612 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-BQ31612 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-BQ31612 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HLA-BQ31612 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HLA-BQ31612 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
HLA-BQ31612 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HLA-BQ31612 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HLA-BQ31612 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.89■□□□□ 0.46
HLA-BQ31612 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HLA-BQ31612 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-BQ31612 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HLA-BQ31612 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.89■□□□□ 0.45
HLA-BQ31612 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HLA-BQ31612 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-BQ31612 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.89■□□□□ 0.45
HLA-BQ31612 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-BQ31612 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.89■□□□□ 0.45
HLA-BQ31612 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-BQ31612 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.89■□□□□ 0.45
HLA-BQ31612 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-BQ31612 AC018712.1-201ENST00000455767 687 ntBASIC17.89■□□□□ 0.45
HLA-BQ31612 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.89■□□□□ 0.45
HLA-BQ31612 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-BQ31612 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.89■□□□□ 0.45
HLA-BQ31612 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-BQ31612 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.89■□□□□ 0.45
HLA-BQ31612 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-BQ31612 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-BQ31612 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
HLA-BQ31612 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HLA-BQ31612 MTMR9LP-203ENST00000426597 1545 ntBASIC17.88■□□□□ 0.45
HLA-BQ31612 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-BQ31612 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
HLA-BQ31612 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-BQ31612 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HLA-BQ31612 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
HLA-BQ31612 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 RPL13AP23-201ENST00000480739 586 ntBASIC17.88■□□□□ 0.45
HLA-BQ31612 AC113404.2-201ENST00000507884 177 ntBASIC17.88■□□□□ 0.45
HLA-BQ31612 AC073648.2-201ENST00000510116 352 ntBASIC17.88■□□□□ 0.45
HLA-BQ31612 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.88■□□□□ 0.45
HLA-BQ31612 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 AC139887.3-201ENST00000568585 713 ntBASIC17.88■□□□□ 0.45
HLA-BQ31612 AC008687.5-201ENST00000593746 558 ntBASIC17.88■□□□□ 0.45
HLA-BQ31612 TERC-201ENST00000602385 541 ntBASIC17.88■□□□□ 0.45
HLA-BQ31612 AL049840.3-201ENST00000602669 611 ntBASIC17.88■□□□□ 0.45
HLA-BQ31612 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.88■□□□□ 0.45
HLA-BQ31612 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 AL355877.3-201ENST00000622820 899 ntBASIC17.88■□□□□ 0.45
HLA-BQ31612 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HLA-BQ31612 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-BQ31612 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-BQ31612 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
HLA-BQ31612 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-BQ31612 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-BQ31612 TP73-AS1-210ENST00000637775 1455 ntBASIC17.88■□□□□ 0.45
HLA-BQ31612 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-BQ31612 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-BQ31612 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-BQ31612 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-BQ31612 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HLA-BQ31612 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HLA-BQ31612 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-BQ31612 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-BQ31612 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-BQ31612 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-BQ31612 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-BQ31612 MIR149-201ENST00000384879 89 ntBASIC17.87■□□□□ 0.45
HLA-BQ31612 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HLA-BQ31612 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HLA-BQ31612 MIR940-201ENST00000401276 94 ntBASIC17.87■□□□□ 0.45
HLA-BQ31612 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-BQ31612 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-BQ31612 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HLA-BQ31612 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-BQ31612 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-BQ31612 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.87■□□□□ 0.45
HLA-BQ31612 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
HLA-BQ31612 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms