Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEP78395 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.65■□□□□ 0.58
PRAMEP78395 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.65■□□□□ 0.58
PRAMEP78395 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEP78395 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PRAMEP78395 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEP78395 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEP78395 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.65■□□□□ 0.58
PRAMEP78395 C2orf69P3-201ENST00000565542 1120 ntBASIC18.65■□□□□ 0.58
PRAMEP78395 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEP78395 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEP78395 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEP78395 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.65■□□□□ 0.58
PRAMEP78395 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEP78395 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEP78395 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEP78395 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PRAMEP78395 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.65■□□□□ 0.58
PRAMEP78395 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEP78395 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEP78395 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.65■□□□□ 0.58
PRAMEP78395 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.65■□□□□ 0.58
PRAMEP78395 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEP78395 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
PRAMEP78395 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
PRAMEP78395 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PRAMEP78395 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PRAMEP78395 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PRAMEP78395 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEP78395 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PRAMEP78395 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.64■□□□□ 0.57
PRAMEP78395 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEP78395 CCR12P-201ENST00000446203 998 ntBASIC18.64■□□□□ 0.57
PRAMEP78395 TSPY17P-201ENST00000450329 467 ntBASIC18.64■□□□□ 0.57
PRAMEP78395 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PRAMEP78395 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.64■□□□□ 0.57
PRAMEP78395 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEP78395 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEP78395 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.64■□□□□ 0.57
PRAMEP78395 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEP78395 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEP78395 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PRAMEP78395 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.64■□□□□ 0.57
PRAMEP78395 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEP78395 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PRAMEP78395 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEP78395 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PRAMEP78395 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.64■□□□□ 0.57
PRAMEP78395 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.64■□□□□ 0.57
PRAMEP78395 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEP78395 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEP78395 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEP78395 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEP78395 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEP78395 LTB4R2-202ENST00000528054 3092 ntBASIC18.63■□□□□ 0.57
PRAMEP78395 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.63■□□□□ 0.57
PRAMEP78395 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEP78395 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEP78395 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.63■□□□□ 0.57
PRAMEP78395 MIR564-202ENST00000385049 94 ntBASIC18.63■□□□□ 0.57
PRAMEP78395 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.63■□□□□ 0.57
PRAMEP78395 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.63■□□□□ 0.57
PRAMEP78395 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.63■□□□□ 0.57
PRAMEP78395 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEP78395 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.63■□□□□ 0.57
PRAMEP78395 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.63■□□□□ 0.57
PRAMEP78395 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.63■□□□□ 0.57
PRAMEP78395 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.63■□□□□ 0.57
PRAMEP78395 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.63■□□□□ 0.57
PRAMEP78395 MIR3180-5-201ENST00000583743 153 ntBASIC18.63■□□□□ 0.57
PRAMEP78395 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEP78395 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEP78395 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEP78395 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.63■□□□□ 0.57
PRAMEP78395 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEP78395 OR6D1P-202ENST00000641007 5290 ntBASIC18.63■□□□□ 0.57
PRAMEP78395 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEP78395 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEP78395 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEP78395 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PRAMEP78395 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PRAMEP78395 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PRAMEP78395 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEP78395 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.63■□□□□ 0.57
PRAMEP78395 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
PRAMEP78395 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEP78395 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.63■□□□□ 0.57
PRAMEP78395 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEP78395 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEP78395 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEP78395 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PRAMEP78395 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PRAMEP78395 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEP78395 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PRAMEP78395 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.62■□□□□ 0.57
PRAMEP78395 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PRAMEP78395 AL353719.1-201ENST00000566847 864 ntBASIC18.62■□□□□ 0.57
PRAMEP78395 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.62■□□□□ 0.57
PRAMEP78395 AL023803.3-201ENST00000615559 522 ntBASIC18.62■□□□□ 0.57
PRAMEP78395 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms