Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
ASIC1P78348 AC010947.1-201ENST00000623454 693 ntBASIC20.63■□□□□ 0.89
ASIC1P78348 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.63■□□□□ 0.89
ASIC1P78348 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ASIC1P78348 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ASIC1P78348 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ASIC1P78348 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.63■□□□□ 0.89
ASIC1P78348 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ASIC1P78348 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
ASIC1P78348 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.62■□□□□ 0.89
ASIC1P78348 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.62■□□□□ 0.89
ASIC1P78348 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
ASIC1P78348 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.62■□□□□ 0.89
ASIC1P78348 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ASIC1P78348 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 AC099343.3-201ENST00000605834 2503 ntBASIC20.62■□□□□ 0.89
ASIC1P78348 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.62■□□□□ 0.89
ASIC1P78348 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ASIC1P78348 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.62■□□□□ 0.89
ASIC1P78348 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.62■□□□□ 0.89
ASIC1P78348 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.62■□□□□ 0.89
ASIC1P78348 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.62■□□□□ 0.89
ASIC1P78348 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.62■□□□□ 0.89
ASIC1P78348 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ASIC1P78348 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ASIC1P78348 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ASIC1P78348 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ASIC1P78348 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.61■□□□□ 0.89
ASIC1P78348 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ASIC1P78348 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ASIC1P78348 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ASIC1P78348 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ASIC1P78348 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ASIC1P78348 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ASIC1P78348 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ASIC1P78348 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ASIC1P78348 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ASIC1P78348 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.61■□□□□ 0.89
ASIC1P78348 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ASIC1P78348 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.61■□□□□ 0.89
ASIC1P78348 WWOX-216ENST00000569818 525 ntBASIC20.61■□□□□ 0.89
ASIC1P78348 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
ASIC1P78348 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.61■□□□□ 0.89
ASIC1P78348 AC010653.2-201ENST00000623505 997 ntBASIC20.61■□□□□ 0.89
ASIC1P78348 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ASIC1P78348 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ASIC1P78348 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ASIC1P78348 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ASIC1P78348 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.61■□□□□ 0.89
ASIC1P78348 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.61■□□□□ 0.89
ASIC1P78348 HTR7P1-202ENST00000624664 4411 ntBASIC20.61■□□□□ 0.89
ASIC1P78348 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ASIC1P78348 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ASIC1P78348 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ASIC1P78348 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.6■□□□□ 0.89
ASIC1P78348 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ASIC1P78348 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ASIC1P78348 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ASIC1P78348 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ASIC1P78348 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ASIC1P78348 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ASIC1P78348 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ASIC1P78348 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ASIC1P78348 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ASIC1P78348 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
ASIC1P78348 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ASIC1P78348 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.6■□□□□ 0.89
ASIC1P78348 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ASIC1P78348 KRT18P23-201ENST00000435622 1283 ntBASIC20.6■□□□□ 0.89
ASIC1P78348 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.6■□□□□ 0.89
ASIC1P78348 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.6■□□□□ 0.89
ASIC1P78348 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ASIC1P78348 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ASIC1P78348 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ASIC1P78348 AL162741.1-201ENST00000565563 1558 ntBASIC20.59■□□□□ 0.89
ASIC1P78348 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ASIC1P78348 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ASIC1P78348 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ASIC1P78348 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ASIC1P78348 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.59■□□□□ 0.89
ASIC1P78348 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.59■□□□□ 0.89
ASIC1P78348 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.59■□□□□ 0.89
ASIC1P78348 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms