Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
DEFA3P59666 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DEFA3P59666 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DEFA3P59666 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
DEFA3P59666 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
DEFA3P59666 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
DEFA3P59666 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.24■□□□□ 0.19
DEFA3P59666 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.24■□□□□ 0.19
DEFA3P59666 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
DEFA3P59666 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.24■□□□□ 0.19
DEFA3P59666 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.24■□□□□ 0.19
DEFA3P59666 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.24■□□□□ 0.19
DEFA3P59666 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
DEFA3P59666 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DEFA3P59666 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
DEFA3P59666 RBM17P2-201ENST00000616397 1405 ntBASIC16.24■□□□□ 0.19
DEFA3P59666 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.24■□□□□ 0.19
DEFA3P59666 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
DEFA3P59666 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
DEFA3P59666 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
DEFA3P59666 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
DEFA3P59666 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
DEFA3P59666 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DEFA3P59666 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.24■□□□□ 0.19
DEFA3P59666 UBALD1-205ENST00000590891 2641 ntBASIC16.24■□□□□ 0.19
DEFA3P59666 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DEFA3P59666 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.24■□□□□ 0.19
DEFA3P59666 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
DEFA3P59666 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
DEFA3P59666 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
DEFA3P59666 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.23■□□□□ 0.19
DEFA3P59666 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
DEFA3P59666 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
DEFA3P59666 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
DEFA3P59666 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
DEFA3P59666 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
DEFA3P59666 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
DEFA3P59666 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
DEFA3P59666 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.23■□□□□ 0.19
DEFA3P59666 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.23■□□□□ 0.19
DEFA3P59666 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 SLC7A5P2-201ENST00000553010 536 ntBASIC16.23■□□□□ 0.19
DEFA3P59666 AL355001.2-201ENST00000620617 1191 ntBASIC16.23■□□□□ 0.19
DEFA3P59666 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
DEFA3P59666 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.23■□□□□ 0.19
DEFA3P59666 PCDHB19P-201ENST00000570871 2371 ntBASIC16.23■□□□□ 0.19
DEFA3P59666 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.23■□□□□ 0.19
DEFA3P59666 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.23■□□□□ 0.19
DEFA3P59666 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
DEFA3P59666 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DEFA3P59666 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.22■□□□□ 0.19
DEFA3P59666 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
DEFA3P59666 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.22■□□□□ 0.19
DEFA3P59666 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
DEFA3P59666 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
DEFA3P59666 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.22■□□□□ 0.19
DEFA3P59666 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
DEFA3P59666 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEFA3P59666 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DEFA3P59666 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEFA3P59666 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.22■□□□□ 0.19
DEFA3P59666 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEFA3P59666 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DEFA3P59666 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.22■□□□□ 0.19
DEFA3P59666 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
DEFA3P59666 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.22■□□□□ 0.19
DEFA3P59666 MYC-208ENST00000641036 567 ntBASIC16.22■□□□□ 0.19
DEFA3P59666 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.22■□□□□ 0.19
DEFA3P59666 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
DEFA3P59666 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEFA3P59666 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.22■□□□□ 0.19
DEFA3P59666 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
DEFA3P59666 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEFA3P59666 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
DEFA3P59666 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEFA3P59666 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEFA3P59666 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
DEFA3P59666 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
DEFA3P59666 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
DEFA3P59666 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.21■□□□□ 0.19
DEFA3P59666 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms