Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PRORSD1P-201ENST00000295112 541 ntBASIC18.1■□□□□ 0.49
CDH13P55290 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH13P55290 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH13P55290 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDH13P55290 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH13P55290 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH13P55290 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH13P55290 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH13P55290 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH13P55290 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH13P55290 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH13P55290 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CDH13P55290 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH13P55290 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH13P55290 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH13P55290 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDH13P55290 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH13P55290 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH13P55290 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH13P55290 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH13P55290 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH13P55290 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH13P55290 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH13P55290 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH13P55290 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.09■□□□□ 0.49
CDH13P55290 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH13P55290 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.09■□□□□ 0.49
CDH13P55290 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH13P55290 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.09■□□□□ 0.49
CDH13P55290 SLC25A1P4-201ENST00000567977 778 ntBASIC18.09■□□□□ 0.49
CDH13P55290 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CDH13P55290 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH13P55290 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH13P55290 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH13P55290 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH13P55290 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH13P55290 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH13P55290 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH13P55290 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH13P55290 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.08■□□□□ 0.49
CDH13P55290 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.08■□□□□ 0.49
CDH13P55290 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CDH13P55290 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH13P55290 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.08■□□□□ 0.49
CDH13P55290 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.08■□□□□ 0.49
CDH13P55290 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH13P55290 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CDH13P55290 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH13P55290 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH13P55290 AL023284.2-201ENST00000405850 579 ntBASIC18.08■□□□□ 0.48
CDH13P55290 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.08■□□□□ 0.48
CDH13P55290 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH13P55290 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.08■□□□□ 0.48
CDH13P55290 AC142381.4-202ENST00000563973 229 ntBASIC18.08■□□□□ 0.48
CDH13P55290 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.08■□□□□ 0.48
CDH13P55290 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
CDH13P55290 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH13P55290 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH13P55290 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH13P55290 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CDH13P55290 GPAT2P1-201ENST00000444924 1672 ntBASIC18.08■□□□□ 0.48
CDH13P55290 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH13P55290 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH13P55290 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CDH13P55290 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH13P55290 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CDH13P55290 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH13P55290 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH13P55290 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH13P55290 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.07■□□□□ 0.48
CDH13P55290 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH13P55290 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH13P55290 AL135905.2-201ENST00000584934 1404 ntBASIC18.07■□□□□ 0.48
CDH13P55290 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH13P55290 AC096733.2-201ENST00000609937 1394 ntBASIC18.07■□□□□ 0.48
CDH13P55290 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH13P55290 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH13P55290 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH13P55290 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH13P55290 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH13P55290 AC008764.6-201ENST00000595909 2069 ntBASIC18.07■□□□□ 0.48
CDH13P55290 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.07■□□□□ 0.48
CDH13P55290 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH13P55290 MFAP1P1-201ENST00000442257 1255 ntBASIC18.07■□□□□ 0.48
CDH13P55290 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH13P55290 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH13P55290 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH13P55290 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH13P55290 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH13P55290 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH13P55290 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH13P55290 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
CDH13P55290 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH13P55290 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH13P55290 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH13P55290 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH13P55290 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH13P55290 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH13P55290 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms