Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCKAP1LP55160 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NCKAP1LP55160 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.21■□□□□ 0.83
NCKAP1LP55160 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.21■□□□□ 0.83
NCKAP1LP55160 AC120498.9-201ENST00000339021 3867 ntBASIC20.21■□□□□ 0.83
NCKAP1LP55160 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCKAP1LP55160 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NCKAP1LP55160 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NCKAP1LP55160 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NCKAP1LP55160 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCKAP1LP55160 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCKAP1LP55160 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NCKAP1LP55160 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCKAP1LP55160 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.21■□□□□ 0.83
NCKAP1LP55160 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NCKAP1LP55160 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.21■□□□□ 0.83
NCKAP1LP55160 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NCKAP1LP55160 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NCKAP1LP55160 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NCKAP1LP55160 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.2■□□□□ 0.82
NCKAP1LP55160 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NCKAP1LP55160 LINC01311-201ENST00000565162 1445 ntBASIC20.2■□□□□ 0.82
NCKAP1LP55160 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCKAP1LP55160 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCKAP1LP55160 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.2■□□□□ 0.82
NCKAP1LP55160 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.2■□□□□ 0.82
NCKAP1LP55160 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NCKAP1LP55160 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCKAP1LP55160 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCKAP1LP55160 AL031133.1-201ENST00000406807 723 ntBASIC20.2■□□□□ 0.82
NCKAP1LP55160 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.2■□□□□ 0.82
NCKAP1LP55160 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NCKAP1LP55160 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NCKAP1LP55160 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCKAP1LP55160 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NCKAP1LP55160 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.2■□□□□ 0.82
NCKAP1LP55160 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCKAP1LP55160 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCKAP1LP55160 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NCKAP1LP55160 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCKAP1LP55160 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NCKAP1LP55160 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NCKAP1LP55160 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.2■□□□□ 0.82
NCKAP1LP55160 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.2■□□□□ 0.82
NCKAP1LP55160 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NCKAP1LP55160 AC090164.3-201ENST00000610780 2143 ntBASIC20.2■□□□□ 0.82
NCKAP1LP55160 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NCKAP1LP55160 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCKAP1LP55160 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1LP55160 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1LP55160 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1LP55160 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1LP55160 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1LP55160 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1LP55160 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1LP55160 KRT18P35-201ENST00000510488 1269 ntBASIC20.19■□□□□ 0.82
NCKAP1LP55160 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1LP55160 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 AL024508.2-201ENST00000607749 1894 ntBASIC20.19■□□□□ 0.82
NCKAP1LP55160 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1LP55160 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1LP55160 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1LP55160 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1LP55160 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1LP55160 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1LP55160 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1LP55160 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NCKAP1LP55160 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1LP55160 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.18■□□□□ 0.82
NCKAP1LP55160 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1LP55160 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
NCKAP1LP55160 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1LP55160 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.18■□□□□ 0.82
NCKAP1LP55160 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1LP55160 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1LP55160 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1LP55160 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.18■□□□□ 0.82
NCKAP1LP55160 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.18■□□□□ 0.82
NCKAP1LP55160 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NCKAP1LP55160 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1LP55160 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1LP55160 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1LP55160 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms