Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAD23BP54727 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RAD23BP54727 AC117947.1-201ENST00000427448 529 ntBASIC19.74■□□□□ 0.75
RAD23BP54727 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAD23BP54727 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.74■□□□□ 0.75
RAD23BP54727 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAD23BP54727 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAD23BP54727 AC104076.2-201ENST00000448912 469 ntBASIC19.74■□□□□ 0.75
RAD23BP54727 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAD23BP54727 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAD23BP54727 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAD23BP54727 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.74■□□□□ 0.75
RAD23BP54727 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.74■□□□□ 0.75
RAD23BP54727 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RAD23BP54727 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAD23BP54727 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.74■□□□□ 0.75
RAD23BP54727 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAD23BP54727 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.74■□□□□ 0.75
RAD23BP54727 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
RAD23BP54727 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAD23BP54727 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAD23BP54727 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.74■□□□□ 0.75
RAD23BP54727 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RAD23BP54727 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAD23BP54727 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAD23BP54727 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.73■□□□□ 0.75
RAD23BP54727 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAD23BP54727 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
RAD23BP54727 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.73■□□□□ 0.75
RAD23BP54727 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAD23BP54727 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAD23BP54727 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAD23BP54727 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.73■□□□□ 0.75
RAD23BP54727 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.73■□□□□ 0.75
RAD23BP54727 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAD23BP54727 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.73■□□□□ 0.75
RAD23BP54727 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.73■□□□□ 0.75
RAD23BP54727 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.73■□□□□ 0.75
RAD23BP54727 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.73■□□□□ 0.75
RAD23BP54727 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAD23BP54727 AP000523.1-201ENST00000398242 1049 ntBASIC19.73■□□□□ 0.75
RAD23BP54727 YBX1P2-201ENST00000489612 999 ntBASIC19.73■□□□□ 0.75
RAD23BP54727 KRT18P21-201ENST00000515767 1272 ntBASIC19.73■□□□□ 0.75
RAD23BP54727 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.73■□□□□ 0.75
RAD23BP54727 GCSHP2-201ENST00000560971 527 ntBASIC19.73■□□□□ 0.75
RAD23BP54727 AL441883.1-201ENST00000566170 1045 ntBASIC19.73■□□□□ 0.75
RAD23BP54727 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RAD23BP54727 AC011558.1-201ENST00000623459 338 ntBASIC19.73■□□□□ 0.75
RAD23BP54727 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAD23BP54727 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.73■□□□□ 0.75
RAD23BP54727 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAD23BP54727 AC007613.1-201ENST00000572811 2597 ntBASIC19.73■□□□□ 0.75
RAD23BP54727 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAD23BP54727 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.72■□□□□ 0.75
RAD23BP54727 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAD23BP54727 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAD23BP54727 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAD23BP54727 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAD23BP54727 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.72■□□□□ 0.75
RAD23BP54727 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAD23BP54727 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RAD23BP54727 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAD23BP54727 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAD23BP54727 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RAD23BP54727 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAD23BP54727 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAD23BP54727 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.72■□□□□ 0.75
RAD23BP54727 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAD23BP54727 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.72■□□□□ 0.75
RAD23BP54727 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAD23BP54727 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.72■□□□□ 0.75
RAD23BP54727 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
RAD23BP54727 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAD23BP54727 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.72■□□□□ 0.75
RAD23BP54727 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.72■□□□□ 0.75
RAD23BP54727 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAD23BP54727 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.72■□□□□ 0.75
RAD23BP54727 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAD23BP54727 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.72■□□□□ 0.75
RAD23BP54727 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RAD23BP54727 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAD23BP54727 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAD23BP54727 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
RAD23BP54727 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAD23BP54727 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAD23BP54727 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAD23BP54727 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAD23BP54727 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAD23BP54727 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.71■□□□□ 0.75
RAD23BP54727 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RAD23BP54727 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.71■□□□□ 0.75
RAD23BP54727 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAD23BP54727 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.71■□□□□ 0.75
RAD23BP54727 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.71■□□□□ 0.75
RAD23BP54727 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAD23BP54727 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
RAD23BP54727 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.71■□□□□ 0.75
RAD23BP54727 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAD23BP54727 AC140113.3-201ENST00000605663 199 ntBASIC19.71■□□□□ 0.75
RAD23BP54727 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms