Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.27■□□□□ 0.2
CX3CR1P49238 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CR1P49238 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CX3CR1P49238 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.27■□□□□ 0.2
CX3CR1P49238 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CR1P49238 AC097488.1-201ENST00000507834 756 ntBASIC16.27■□□□□ 0.2
CX3CR1P49238 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.27■□□□□ 0.2
CX3CR1P49238 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.27■□□□□ 0.2
CX3CR1P49238 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.27■□□□□ 0.2
CX3CR1P49238 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.27■□□□□ 0.2
CX3CR1P49238 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.27■□□□□ 0.2
CX3CR1P49238 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.27■□□□□ 0.2
CX3CR1P49238 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.27■□□□□ 0.2
CX3CR1P49238 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.27■□□□□ 0.2
CX3CR1P49238 AC008622.2-201ENST00000617006 1229 ntBASIC16.27■□□□□ 0.2
CX3CR1P49238 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
CX3CR1P49238 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CR1P49238 AC008556.1-201ENST00000610908 2040 ntBASIC16.27■□□□□ 0.2
CX3CR1P49238 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.27■□□□□ 0.2
CX3CR1P49238 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CX3CR1P49238 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CX3CR1P49238 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CX3CR1P49238 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CX3CR1P49238 AL109659.2-201ENST00000606809 1674 ntBASIC16.27■□□□□ 0.19
CX3CR1P49238 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CX3CR1P49238 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CX3CR1P49238 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.27■□□□□ 0.19
CX3CR1P49238 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CX3CR1P49238 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CX3CR1P49238 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.27■□□□□ 0.19
CX3CR1P49238 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.26■□□□□ 0.19
CX3CR1P49238 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CR1P49238 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CR1P49238 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CX3CR1P49238 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CR1P49238 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.26■□□□□ 0.19
CX3CR1P49238 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.26■□□□□ 0.19
CX3CR1P49238 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CR1P49238 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CR1P49238 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CR1P49238 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.26■□□□□ 0.19
CX3CR1P49238 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CX3CR1P49238 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.26■□□□□ 0.19
CX3CR1P49238 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.26■□□□□ 0.19
CX3CR1P49238 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.26■□□□□ 0.19
CX3CR1P49238 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CX3CR1P49238 AL355355.2-201ENST00000442321 338 ntBASIC16.26■□□□□ 0.19
CX3CR1P49238 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CR1P49238 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.26■□□□□ 0.19
CX3CR1P49238 REXO1L10P-201ENST00000615707 1290 ntBASIC16.26■□□□□ 0.19
CX3CR1P49238 REXO1L12P-201ENST00000622156 912 ntBASIC16.26■□□□□ 0.19
CX3CR1P49238 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.26■□□□□ 0.19
CX3CR1P49238 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CR1P49238 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CR1P49238 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CX3CR1P49238 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CR1P49238 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CR1P49238 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CR1P49238 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.26■□□□□ 0.19
CX3CR1P49238 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CR1P49238 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.26■□□□□ 0.19
CX3CR1P49238 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CR1P49238 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CR1P49238 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CX3CR1P49238 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CX3CR1P49238 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CR1P49238 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CX3CR1P49238 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.26■□□□□ 0.19
CX3CR1P49238 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CR1P49238 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CX3CR1P49238 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CR1P49238 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CR1P49238 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.25■□□□□ 0.19
CX3CR1P49238 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CR1P49238 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.25■□□□□ 0.19
CX3CR1P49238 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CR1P49238 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CR1P49238 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CR1P49238 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CR1P49238 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CR1P49238 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CX3CR1P49238 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.25■□□□□ 0.19
CX3CR1P49238 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CR1P49238 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.25■□□□□ 0.19
CX3CR1P49238 MCCD1P1-208ENST00000445732 328 ntBASIC16.25■□□□□ 0.19
CX3CR1P49238 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.25■□□□□ 0.19
CX3CR1P49238 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.25■□□□□ 0.19
CX3CR1P49238 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.25■□□□□ 0.19
CX3CR1P49238 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.25■□□□□ 0.19
CX3CR1P49238 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
CX3CR1P49238 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.25■□□□□ 0.19
CX3CR1P49238 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.25■□□□□ 0.19
CX3CR1P49238 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CR1P49238 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CR1P49238 ABALON-201ENST00000629058 1903 ntBASIC16.25■□□□□ 0.19
CX3CR1P49238 AC018470.1-201ENST00000624790 3129 ntBASIC16.25■□□□□ 0.19
CX3CR1P49238 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CR1P49238 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CX3CR1P49238 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CX3CR1P49238 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms