Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
PCP4P48539 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.73□□□□□ -0.37
PCP4P48539 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.73□□□□□ -0.37
PCP4P48539 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC12.73□□□□□ -0.37
PCP4P48539 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC12.73□□□□□ -0.37
PCP4P48539 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
PCP4P48539 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
PCP4P48539 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC12.73□□□□□ -0.37
PCP4P48539 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC12.73□□□□□ -0.37
PCP4P48539 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 ST20-AS1-201ENST00000560255 4223 ntBASIC12.73□□□□□ -0.37
PCP4P48539 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC12.73□□□□□ -0.37
PCP4P48539 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
PCP4P48539 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC12.73□□□□□ -0.37
PCP4P48539 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
PCP4P48539 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
PCP4P48539 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC12.73□□□□□ -0.37
PCP4P48539 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 REXO1L2P-201ENST00000425429 2069 ntBASIC12.73□□□□□ -0.37
PCP4P48539 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCP4P48539 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 AL161729.1-201ENST00000604104 1402 ntBASIC12.72□□□□□ -0.37
PCP4P48539 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
PCP4P48539 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.72□□□□□ -0.37
PCP4P48539 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
PCP4P48539 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.72□□□□□ -0.37
PCP4P48539 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.72□□□□□ -0.37
PCP4P48539 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 OR2I1P-210ENST00000642037 4691 ntBASIC12.72□□□□□ -0.37
PCP4P48539 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
PCP4P48539 LINC00552-201ENST00000625151 2579 ntBASIC12.72□□□□□ -0.37
PCP4P48539 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCP4P48539 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.71□□□□□ -0.37
PCP4P48539 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
PCP4P48539 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PCP4P48539 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.71□□□□□ -0.37
PCP4P48539 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PCP4P48539 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PCP4P48539 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PCP4P48539 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PCP4P48539 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.71□□□□□ -0.37
PCP4P48539 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
PCP4P48539 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.71□□□□□ -0.37
PCP4P48539 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PCP4P48539 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.71□□□□□ -0.37
PCP4P48539 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
PCP4P48539 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
PCP4P48539 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
PCP4P48539 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC12.71□□□□□ -0.38
PCP4P48539 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PCP4P48539 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PCP4P48539 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
PCP4P48539 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.71□□□□□ -0.38
PCP4P48539 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
PCP4P48539 AL731571.1-201ENST00000617058 5428 ntBASIC12.71□□□□□ -0.38
PCP4P48539 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PCP4P48539 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.71□□□□□ -0.38
PCP4P48539 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
PCP4P48539 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
PCP4P48539 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
PCP4P48539 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PCP4P48539 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC12.71□□□□□ -0.38
PCP4P48539 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.38
PCP4P48539 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PCP4P48539 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PCP4P48539 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms