Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.03■□□□□ 0.96
TM4SF4P48230 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.03■□□□□ 0.96
TM4SF4P48230 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
TM4SF4P48230 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.03■□□□□ 0.96
TM4SF4P48230 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF4P48230 AC064836.3-201ENST00000607928 673 ntBASIC21.03■□□□□ 0.96
TM4SF4P48230 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TM4SF4P48230 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF4P48230 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF4P48230 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
TM4SF4P48230 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF4P48230 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.03■□□□□ 0.96
TM4SF4P48230 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.03■□□□□ 0.96
TM4SF4P48230 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
TM4SF4P48230 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TM4SF4P48230 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.03■□□□□ 0.96
TM4SF4P48230 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.03■□□□□ 0.96
TM4SF4P48230 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF4P48230 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TM4SF4P48230 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF4P48230 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF4P48230 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF4P48230 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TM4SF4P48230 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF4P48230 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.02■□□□□ 0.96
TM4SF4P48230 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.02■□□□□ 0.96
TM4SF4P48230 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.02■□□□□ 0.96
TM4SF4P48230 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.02■□□□□ 0.96
TM4SF4P48230 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF4P48230 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.02■□□□□ 0.96
TM4SF4P48230 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF4P48230 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF4P48230 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.02■□□□□ 0.95
TM4SF4P48230 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TM4SF4P48230 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TM4SF4P48230 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
TM4SF4P48230 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM4SF4P48230 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM4SF4P48230 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.01■□□□□ 0.95
TM4SF4P48230 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TM4SF4P48230 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TM4SF4P48230 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.01■□□□□ 0.95
TM4SF4P48230 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM4SF4P48230 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM4SF4P48230 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
TM4SF4P48230 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.01■□□□□ 0.95
TM4SF4P48230 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM4SF4P48230 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.01■□□□□ 0.95
TM4SF4P48230 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.01■□□□□ 0.95
TM4SF4P48230 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.01■□□□□ 0.95
TM4SF4P48230 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.01■□□□□ 0.95
TM4SF4P48230 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.01■□□□□ 0.95
TM4SF4P48230 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.01■□□□□ 0.95
TM4SF4P48230 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.01■□□□□ 0.95
TM4SF4P48230 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.01■□□□□ 0.95
TM4SF4P48230 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.01■□□□□ 0.95
TM4SF4P48230 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM4SF4P48230 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21■□□□□ 0.95
TM4SF4P48230 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
TM4SF4P48230 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TM4SF4P48230 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TM4SF4P48230 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TM4SF4P48230 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21■□□□□ 0.95
TM4SF4P48230 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TM4SF4P48230 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TM4SF4P48230 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TM4SF4P48230 AL035633.1-201ENST00000406139 838 ntBASIC21■□□□□ 0.95
TM4SF4P48230 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21■□□□□ 0.95
TM4SF4P48230 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21■□□□□ 0.95
TM4SF4P48230 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21■□□□□ 0.95
TM4SF4P48230 AC244107.1-201ENST00000442033 332 ntBASIC21■□□□□ 0.95
TM4SF4P48230 KRT18P2-201ENST00000447938 1258 ntBASIC21■□□□□ 0.95
TM4SF4P48230 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21■□□□□ 0.95
TM4SF4P48230 MIR4469-201ENST00000583919 79 ntBASIC21■□□□□ 0.95
TM4SF4P48230 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21■□□□□ 0.95
TM4SF4P48230 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21■□□□□ 0.95
TM4SF4P48230 AP000867.4-201ENST00000641616 219 ntBASIC21■□□□□ 0.95
TM4SF4P48230 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21■□□□□ 0.95
TM4SF4P48230 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TM4SF4P48230 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF4P48230 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.99■□□□□ 0.95
TM4SF4P48230 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.99■□□□□ 0.95
TM4SF4P48230 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF4P48230 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.99■□□□□ 0.95
TM4SF4P48230 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF4P48230 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.99■□□□□ 0.95
TM4SF4P48230 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF4P48230 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF4P48230 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF4P48230 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF4P48230 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF4P48230 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF4P48230 MIR149-201ENST00000384879 89 ntBASIC20.99■□□□□ 0.95
TM4SF4P48230 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF4P48230 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF4P48230 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF4P48230 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF4P48230 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.99■□□□□ 0.95
TM4SF4P48230 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
TM4SF4P48230 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms