Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 KRT8P32-201ENST00000512863 1461 ntBASIC19.31■□□□□ 0.68
MTHFRP42898 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MTHFRP42898 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MTHFRP42898 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MTHFRP42898 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MTHFRP42898 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.31■□□□□ 0.68
MTHFRP42898 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MTHFRP42898 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.31■□□□□ 0.68
MTHFRP42898 KRT18P67-201ENST00000432816 1264 ntBASIC19.31■□□□□ 0.68
MTHFRP42898 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.31■□□□□ 0.68
MTHFRP42898 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.31■□□□□ 0.68
MTHFRP42898 AF186996.4-201ENST00000467186 377 ntBASIC19.31■□□□□ 0.68
MTHFRP42898 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.31■□□□□ 0.68
MTHFRP42898 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.31■□□□□ 0.68
MTHFRP42898 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.31■□□□□ 0.68
MTHFRP42898 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.31■□□□□ 0.68
MTHFRP42898 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.31■□□□□ 0.68
MTHFRP42898 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MTHFRP42898 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MTHFRP42898 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
MTHFRP42898 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.31■□□□□ 0.68
MTHFRP42898 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.31■□□□□ 0.68
MTHFRP42898 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MTHFRP42898 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
MTHFRP42898 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.31■□□□□ 0.68
MTHFRP42898 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MTHFRP42898 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MTHFRP42898 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
MTHFRP42898 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MTHFRP42898 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MTHFRP42898 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MTHFRP42898 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
MTHFRP42898 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
MTHFRP42898 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MTHFRP42898 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MTHFRP42898 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.3■□□□□ 0.68
MTHFRP42898 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
MTHFRP42898 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
MTHFRP42898 AL031284.1-201ENST00000419297 478 ntBASIC19.3■□□□□ 0.68
MTHFRP42898 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.3■□□□□ 0.68
MTHFRP42898 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.3■□□□□ 0.68
MTHFRP42898 AL591684.3-201ENST00000605187 298 ntBASIC19.3■□□□□ 0.68
MTHFRP42898 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MTHFRP42898 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.3■□□□□ 0.68
MTHFRP42898 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MTHFRP42898 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
MTHFRP42898 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MTHFRP42898 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MTHFRP42898 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.3■□□□□ 0.68
MTHFRP42898 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.3■□□□□ 0.68
MTHFRP42898 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.3■□□□□ 0.68
MTHFRP42898 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
MTHFRP42898 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MTHFRP42898 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MTHFRP42898 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MTHFRP42898 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MTHFRP42898 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.29■□□□□ 0.68
MTHFRP42898 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MTHFRP42898 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MTHFRP42898 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MTHFRP42898 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.29■□□□□ 0.68
MTHFRP42898 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MTHFRP42898 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MTHFRP42898 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MTHFRP42898 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.29■□□□□ 0.68
MTHFRP42898 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MTHFRP42898 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.29■□□□□ 0.68
MTHFRP42898 RNPS1P1-201ENST00000507437 918 ntBASIC19.29■□□□□ 0.68
MTHFRP42898 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MTHFRP42898 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.29■□□□□ 0.68
MTHFRP42898 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MTHFRP42898 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
MTHFRP42898 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MTHFRP42898 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.29■□□□□ 0.68
MTHFRP42898 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
MTHFRP42898 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.29■□□□□ 0.68
MTHFRP42898 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MTHFRP42898 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MTHFRP42898 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MTHFRP42898 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MTHFRP42898 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MTHFRP42898 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MTHFRP42898 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MTHFRP42898 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MTHFRP42898 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.28■□□□□ 0.68
MTHFRP42898 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.28■□□□□ 0.68
MTHFRP42898 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
MTHFRP42898 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MTHFRP42898 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MTHFRP42898 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MTHFRP42898 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.28■□□□□ 0.68
MTHFRP42898 AC091607.1-201ENST00000490318 1060 ntBASIC19.28■□□□□ 0.68
MTHFRP42898 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.28■□□□□ 0.68
MTHFRP42898 SLC25A1P1-201ENST00000528351 927 ntBASIC19.28■□□□□ 0.68
MTHFRP42898 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.28■□□□□ 0.68
MTHFRP42898 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MTHFRP42898 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MTHFRP42898 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MTHFRP42898 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
MTHFRP42898 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms