Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.72■□□□□ 0.91
HTTP42858 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.72■□□□□ 0.91
HTTP42858 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HTTP42858 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HTTP42858 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.72■□□□□ 0.91
HTTP42858 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HTTP42858 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.72■□□□□ 0.91
HTTP42858 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.72■□□□□ 0.91
HTTP42858 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTTP42858 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
HTTP42858 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.72■□□□□ 0.91
HTTP42858 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.72■□□□□ 0.91
HTTP42858 COX20P2-201ENST00000452636 358 ntBASIC20.72■□□□□ 0.91
HTTP42858 OR7E14P-202ENST00000530490 1290 ntBASIC20.72■□□□□ 0.91
HTTP42858 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.72■□□□□ 0.91
HTTP42858 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTTP42858 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HTTP42858 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HTTP42858 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HTTP42858 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HTTP42858 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.71■□□□□ 0.91
HTTP42858 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HTTP42858 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HTTP42858 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
HTTP42858 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HTTP42858 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HTTP42858 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HTTP42858 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HTTP42858 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.71■□□□□ 0.91
HTTP42858 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.71■□□□□ 0.91
HTTP42858 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.71■□□□□ 0.91
HTTP42858 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HTTP42858 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HTTP42858 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HTTP42858 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.71■□□□□ 0.91
HTTP42858 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HTTP42858 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HTTP42858 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HTTP42858 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HTTP42858 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.71■□□□□ 0.91
HTTP42858 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.71■□□□□ 0.91
HTTP42858 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.71■□□□□ 0.91
HTTP42858 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HTTP42858 AL096865.1-201ENST00000606796 927 ntBASIC20.71■□□□□ 0.91
HTTP42858 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HTTP42858 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HTTP42858 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HTTP42858 AP002414.3-201ENST00000589352 1468 ntBASIC20.7■□□□□ 0.9
HTTP42858 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.7■□□□□ 0.9
HTTP42858 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.7■□□□□ 0.9
HTTP42858 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.7■□□□□ 0.9
HTTP42858 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.7■□□□□ 0.9
HTTP42858 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HTTP42858 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HTTP42858 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
HTTP42858 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HTTP42858 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HTTP42858 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
HTTP42858 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HTTP42858 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.7■□□□□ 0.9
HTTP42858 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.7■□□□□ 0.9
HTTP42858 AC012645.4-201ENST00000610691 1061 ntBASIC20.7■□□□□ 0.9
HTTP42858 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HTTP42858 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.7■□□□□ 0.9
HTTP42858 MCCD1P2-201ENST00000423228 335 ntBASIC20.69■□□□□ 0.9
HTTP42858 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.69■□□□□ 0.9
HTTP42858 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HTTP42858 AL356309.3-201ENST00000624132 1934 ntBASIC20.69■□□□□ 0.9
HTTP42858 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.69■□□□□ 0.9
HTTP42858 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HTTP42858 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
HTTP42858 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HTTP42858 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HTTP42858 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
HTTP42858 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HTTP42858 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HTTP42858 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.69■□□□□ 0.9
HTTP42858 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
HTTP42858 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.69■□□□□ 0.9
HTTP42858 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
HTTP42858 AC107918.4-202ENST00000641623 219 ntBASIC20.69■□□□□ 0.9
HTTP42858 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HTTP42858 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HTTP42858 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
HTTP42858 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.69■□□□□ 0.9
HTTP42858 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HTTP42858 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HTTP42858 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.69■□□□□ 0.9
HTTP42858 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.69■□□□□ 0.9
HTTP42858 AC092364.2-202ENST00000597012 1073 ntBASIC20.69■□□□□ 0.9
HTTP42858 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HTTP42858 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HTTP42858 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.68■□□□□ 0.9
HTTP42858 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HTTP42858 AL139400.1-201ENST00000366220 510 ntBASIC20.68■□□□□ 0.9
HTTP42858 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.68■□□□□ 0.9
HTTP42858 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.68■□□□□ 0.9
HTTP42858 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.68■□□□□ 0.9
HTTP42858 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
HTTP42858 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms