Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN1P35523 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN1P35523 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN1P35523 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CLCN1P35523 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN1P35523 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CLCN1P35523 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN1P35523 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CLCN1P35523 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.03■□□□□ 0.96
CLCN1P35523 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.03■□□□□ 0.96
CLCN1P35523 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN1P35523 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.03■□□□□ 0.96
CLCN1P35523 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CLCN1P35523 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN1P35523 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN1P35523 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN1P35523 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN1P35523 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN1P35523 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
CLCN1P35523 AP001094.4-201ENST00000579008 2176 ntBASIC21.03■□□□□ 0.96
CLCN1P35523 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN1P35523 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN1P35523 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.03■□□□□ 0.96
CLCN1P35523 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN1P35523 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CLCN1P35523 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN1P35523 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN1P35523 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.02■□□□□ 0.96
CLCN1P35523 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN1P35523 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN1P35523 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC21.02■□□□□ 0.96
CLCN1P35523 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.02■□□□□ 0.96
CLCN1P35523 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.02■□□□□ 0.96
CLCN1P35523 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.02■□□□□ 0.96
CLCN1P35523 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CLCN1P35523 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.02■□□□□ 0.96
CLCN1P35523 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.02■□□□□ 0.96
CLCN1P35523 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN1P35523 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CLCN1P35523 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN1P35523 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN1P35523 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN1P35523 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN1P35523 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.02■□□□□ 0.96
CLCN1P35523 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN1P35523 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN1P35523 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN1P35523 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.02■□□□□ 0.96
CLCN1P35523 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN1P35523 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
CLCN1P35523 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
CLCN1P35523 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CLCN1P35523 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CLCN1P35523 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CLCN1P35523 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.01■□□□□ 0.95
CLCN1P35523 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC21.01■□□□□ 0.95
CLCN1P35523 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN1P35523 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN1P35523 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
CLCN1P35523 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN1P35523 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN1P35523 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CLCN1P35523 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CLCN1P35523 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN1P35523 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN1P35523 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.01■□□□□ 0.95
CLCN1P35523 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.01■□□□□ 0.95
CLCN1P35523 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.01■□□□□ 0.95
CLCN1P35523 AC120498.8-201ENST00000614275 531 ntBASIC21.01■□□□□ 0.95
CLCN1P35523 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC21.01■□□□□ 0.95
CLCN1P35523 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN1P35523 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN1P35523 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
CLCN1P35523 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN1P35523 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN1P35523 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN1P35523 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CLCN1P35523 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN1P35523 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.01■□□□□ 0.95
CLCN1P35523 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN1P35523 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN1P35523 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN1P35523 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CLCN1P35523 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN1P35523 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21■□□□□ 0.95
CLCN1P35523 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN1P35523 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN1P35523 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC21■□□□□ 0.95
CLCN1P35523 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN1P35523 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21■□□□□ 0.95
CLCN1P35523 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLCN1P35523 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN1P35523 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLCN1P35523 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN1P35523 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
CLCN1P35523 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLCN1P35523 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CLCN1P35523 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21■□□□□ 0.95
CLCN1P35523 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN1P35523 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms