Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 ECEL1P2-202ENST00000465689 757 ntBASIC19.48■□□□□ 0.71
RFC1P35251 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.48■□□□□ 0.71
RFC1P35251 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.48■□□□□ 0.71
RFC1P35251 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.48■□□□□ 0.71
RFC1P35251 WWOX-216ENST00000569818 525 ntBASIC19.48■□□□□ 0.71
RFC1P35251 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFC1P35251 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFC1P35251 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFC1P35251 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFC1P35251 KRT8P50-201ENST00000562022 1438 ntBASIC19.48■□□□□ 0.71
RFC1P35251 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFC1P35251 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFC1P35251 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFC1P35251 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.47■□□□□ 0.71
RFC1P35251 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RFC1P35251 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFC1P35251 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RFC1P35251 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC1P35251 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RFC1P35251 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC1P35251 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC1P35251 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.47■□□□□ 0.71
RFC1P35251 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFC1P35251 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC1P35251 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RFC1P35251 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.47■□□□□ 0.71
RFC1P35251 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.47■□□□□ 0.71
RFC1P35251 AC128688.1-201ENST00000487626 519 ntBASIC19.47■□□□□ 0.71
RFC1P35251 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RFC1P35251 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.47■□□□□ 0.71
RFC1P35251 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFC1P35251 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
RFC1P35251 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
RFC1P35251 FAM87A-204ENST00000613235 858 ntBASIC19.47■□□□□ 0.71
RFC1P35251 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.47■□□□□ 0.71
RFC1P35251 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC1P35251 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC1P35251 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFC1P35251 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC1P35251 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RFC1P35251 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC1P35251 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.47■□□□□ 0.71
RFC1P35251 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC1P35251 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RFC1P35251 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC1P35251 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.46■□□□□ 0.71
RFC1P35251 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.46■□□□□ 0.71
RFC1P35251 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC1P35251 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC1P35251 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC1P35251 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC1P35251 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC1P35251 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.46■□□□□ 0.71
RFC1P35251 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.46■□□□□ 0.71
RFC1P35251 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.46■□□□□ 0.71
RFC1P35251 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC1P35251 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
RFC1P35251 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC1P35251 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC1P35251 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC1P35251 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC1P35251 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC1P35251 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RFC1P35251 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC1P35251 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.46■□□□□ 0.71
RFC1P35251 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFC1P35251 AC099343.3-201ENST00000605834 2503 ntBASIC19.46■□□□□ 0.71
RFC1P35251 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC1P35251 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.46■□□□□ 0.71
RFC1P35251 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFC1P35251 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC1P35251 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC1P35251 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.45■□□□□ 0.7
RFC1P35251 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC1P35251 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFC1P35251 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.45■□□□□ 0.7
RFC1P35251 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFC1P35251 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC1P35251 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RFC1P35251 AC087499.1-201ENST00000418141 1075 ntBASIC19.45■□□□□ 0.7
RFC1P35251 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.45■□□□□ 0.7
RFC1P35251 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
RFC1P35251 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.45■□□□□ 0.7
RFC1P35251 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.45■□□□□ 0.7
RFC1P35251 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.45■□□□□ 0.7
RFC1P35251 AC007613.1-201ENST00000572811 2597 ntBASIC19.45■□□□□ 0.7
RFC1P35251 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC1P35251 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.45■□□□□ 0.7
RFC1P35251 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RFC1P35251 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.45■□□□□ 0.7
RFC1P35251 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC1P35251 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC1P35251 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC1P35251 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC1P35251 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC1P35251 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC1P35251 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC1P35251 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC1P35251 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC1P35251 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms