Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.53■□□□□ 0.08
LMO1P25800 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO1P25800 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.53■□□□□ 0.08
LMO1P25800 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.53■□□□□ 0.08
LMO1P25800 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.53■□□□□ 0.08
LMO1P25800 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LMO1P25800 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO1P25800 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO1P25800 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO1P25800 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.53■□□□□ 0.08
LMO1P25800 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
LMO1P25800 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO1P25800 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.53■□□□□ 0.08
LMO1P25800 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
LMO1P25800 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LMO1P25800 HOXB1-202ENST00000577092 1414 ntBASIC15.52■□□□□ 0.08
LMO1P25800 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.52■□□□□ 0.08
LMO1P25800 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.52■□□□□ 0.08
LMO1P25800 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LMO1P25800 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
LMO1P25800 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
LMO1P25800 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.52■□□□□ 0.08
LMO1P25800 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LMO1P25800 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LMO1P25800 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.52■□□□□ 0.08
LMO1P25800 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
LMO1P25800 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
LMO1P25800 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
LMO1P25800 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.52■□□□□ 0.08
LMO1P25800 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.52■□□□□ 0.08
LMO1P25800 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.52■□□□□ 0.08
LMO1P25800 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.52■□□□□ 0.08
LMO1P25800 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.52■□□□□ 0.08
LMO1P25800 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.52■□□□□ 0.08
LMO1P25800 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LMO1P25800 C2orf69P3-201ENST00000565542 1120 ntBASIC15.52■□□□□ 0.08
LMO1P25800 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.52■□□□□ 0.08
LMO1P25800 AC010653.2-201ENST00000623505 997 ntBASIC15.52■□□□□ 0.08
LMO1P25800 AC116562.4-202ENST00000641738 218 ntBASIC15.52■□□□□ 0.08
LMO1P25800 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.52■□□□□ 0.08
LMO1P25800 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMO1P25800 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.52■□□□□ 0.07
LMO1P25800 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMO1P25800 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.07
LMO1P25800 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.52■□□□□ 0.07
LMO1P25800 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMO1P25800 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LMO1P25800 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMO1P25800 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMO1P25800 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LMO1P25800 KRT8P50-201ENST00000562022 1438 ntBASIC15.51■□□□□ 0.07
LMO1P25800 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LMO1P25800 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LMO1P25800 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.51■□□□□ 0.07
LMO1P25800 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMO1P25800 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.51■□□□□ 0.07
LMO1P25800 ABALON-201ENST00000629058 1903 ntBASIC15.51■□□□□ 0.07
LMO1P25800 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.51■□□□□ 0.07
LMO1P25800 AC036111.1-201ENST00000533973 1582 ntBASIC15.51■□□□□ 0.07
LMO1P25800 TSPY14P-201ENST00000303979 915 ntBASIC15.51■□□□□ 0.07
LMO1P25800 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMO1P25800 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMO1P25800 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.51■□□□□ 0.07
LMO1P25800 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LMO1P25800 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.51■□□□□ 0.07
LMO1P25800 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.51■□□□□ 0.07
LMO1P25800 AC007663.1-201ENST00000438948 1240 ntBASIC15.51■□□□□ 0.07
LMO1P25800 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.51■□□□□ 0.07
LMO1P25800 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LMO1P25800 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.51■□□□□ 0.07
LMO1P25800 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.51■□□□□ 0.07
LMO1P25800 BX088651.1-201ENST00000540551 451 ntBASIC15.51■□□□□ 0.07
LMO1P25800 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.51■□□□□ 0.07
LMO1P25800 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMO1P25800 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMO1P25800 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMO1P25800 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LMO1P25800 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LMO1P25800 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LMO1P25800 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMO1P25800 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMO1P25800 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LMO1P25800 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LMO1P25800 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.5■□□□□ 0.07
LMO1P25800 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LMO1P25800 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.5■□□□□ 0.07
LMO1P25800 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LMO1P25800 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LMO1P25800 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LMO1P25800 MIR1238-201ENST00000408483 83 ntBASIC15.5■□□□□ 0.07
LMO1P25800 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.5■□□□□ 0.07
LMO1P25800 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LMO1P25800 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.5■□□□□ 0.07
LMO1P25800 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.5■□□□□ 0.07
LMO1P25800 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.5■□□□□ 0.07
LMO1P25800 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.5■□□□□ 0.07
LMO1P25800 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LMO1P25800 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.5■□□□□ 0.07
LMO1P25800 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LMO1P25800 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms