Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP8P22894 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP8P22894 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MMP8P22894 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
MMP8P22894 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MMP8P22894 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MMP8P22894 ECEL1P3-201ENST00000427961 737 ntBASIC19.44■□□□□ 0.7
MMP8P22894 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
MMP8P22894 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.44■□□□□ 0.7
MMP8P22894 SEC1P-202ENST00000473944 940 ntBASIC19.44■□□□□ 0.7
MMP8P22894 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
MMP8P22894 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.44■□□□□ 0.7
MMP8P22894 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.44■□□□□ 0.7
MMP8P22894 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.44■□□□□ 0.7
MMP8P22894 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.44■□□□□ 0.7
MMP8P22894 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.44■□□□□ 0.7
MMP8P22894 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
MMP8P22894 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MMP8P22894 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP8P22894 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.44■□□□□ 0.7
MMP8P22894 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.44■□□□□ 0.7
MMP8P22894 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP8P22894 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.44■□□□□ 0.7
MMP8P22894 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
MMP8P22894 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.44■□□□□ 0.7
MMP8P22894 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.44■□□□□ 0.7
MMP8P22894 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MMP8P22894 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.43■□□□□ 0.7
MMP8P22894 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.43■□□□□ 0.7
MMP8P22894 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MMP8P22894 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
MMP8P22894 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.43■□□□□ 0.7
MMP8P22894 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MMP8P22894 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.43■□□□□ 0.7
MMP8P22894 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
MMP8P22894 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.43■□□□□ 0.7
MMP8P22894 AC012306.2-201ENST00000609350 630 ntBASIC19.43■□□□□ 0.7
MMP8P22894 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.43■□□□□ 0.7
MMP8P22894 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MMP8P22894 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MMP8P22894 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MMP8P22894 GMCL1P1-201ENST00000463439 1581 ntBASIC19.43■□□□□ 0.7
MMP8P22894 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MMP8P22894 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MMP8P22894 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MMP8P22894 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MMP8P22894 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MMP8P22894 NOC2LP1-202ENST00000452600 2235 ntBASIC19.43■□□□□ 0.7
MMP8P22894 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MMP8P22894 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP8P22894 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MMP8P22894 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
MMP8P22894 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP8P22894 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.42■□□□□ 0.7
MMP8P22894 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MMP8P22894 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.42■□□□□ 0.7
MMP8P22894 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP8P22894 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MMP8P22894 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
MMP8P22894 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.42■□□□□ 0.7
MMP8P22894 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.42■□□□□ 0.7
MMP8P22894 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.42■□□□□ 0.7
MMP8P22894 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP8P22894 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP8P22894 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP8P22894 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP8P22894 AC010240.3-201ENST00000607688 395 ntBASIC19.42■□□□□ 0.7
MMP8P22894 AL138966.2-201ENST00000621997 464 ntBASIC19.42■□□□□ 0.7
MMP8P22894 AC073912.3-201ENST00000624414 853 ntBASIC19.42■□□□□ 0.7
MMP8P22894 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.42■□□□□ 0.7
MMP8P22894 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.42■□□□□ 0.7
MMP8P22894 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MMP8P22894 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.42■□□□□ 0.7
MMP8P22894 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.42■□□□□ 0.7
MMP8P22894 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP8P22894 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
MMP8P22894 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.42■□□□□ 0.7
MMP8P22894 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MMP8P22894 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP8P22894 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MMP8P22894 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP8P22894 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP8P22894 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MMP8P22894 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.41■□□□□ 0.7
MMP8P22894 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MMP8P22894 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.41■□□□□ 0.7
MMP8P22894 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
MMP8P22894 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.41■□□□□ 0.7
MMP8P22894 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MMP8P22894 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.41■□□□□ 0.7
MMP8P22894 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP8P22894 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.41■□□□□ 0.7
MMP8P22894 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.41■□□□□ 0.7
MMP8P22894 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.41■□□□□ 0.7
MMP8P22894 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.41■□□□□ 0.7
MMP8P22894 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.41■□□□□ 0.7
MMP8P22894 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.41■□□□□ 0.7
MMP8P22894 AC024243.1-201ENST00000609234 778 ntBASIC19.41■□□□□ 0.7
MMP8P22894 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.41■□□□□ 0.7
MMP8P22894 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms